Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124486399

Identifier: 124486399

GI number: 124486399

Start: 1615467

End: 1615712

Strand: Reverse

Name: 124486399

Synonym: Mlab_1584

Alternate gene names: NA

Gene position: 1615712-1615467 (Counterclockwise)

Preceding gene: 124486400

Following gene: 124486398

Centisome position: 89.52

GC content: 40.24

Gene sequence:

>246_bases
ATGGCTAAAAACGAGAAAAAGACCGATGAAAAAAAGGCACTCCCTTCCGTCCAGATAAAGAAACCGGAGATTACGAAAGC
AAGTGTCTCAGAATTCTTCAGAAAATATATCCGTGTTCTAAAACTTGCACGCAGACCTACAAAAGAGGAGTTCTGGAAAA
TTTCCGCAGTCGCTGCAGTAGGAATCGTACTTATCGGCGTTCTCGGATTTCTGATATATCTGATATTTGAATATCTCCTT
CCATAA

Upstream 100 bases:

>100_bases
TCACCACAGATTTATGGTAAGCAGGAACAAATATCTAGGGCATCACAATCAAGTCAGGTCCAGCGCTCAAAGTTTGAGAT
TGACTTCCTGAGGTGAATAC

Downstream 100 bases:

>100_bases
CTATGACTGAATCAAAGTTTGGCAATCACTACTATATCTTAAAGACGACATCCAAGCACGAGCGGACCGTTGCCGATAAC
ATCCGCGAGGCAATCGAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 80

Protein sequence:

>81_residues
MAKNEKKTDEKKALPSVQIKKPEITKASVSEFFRKYIRVLKLARRPTKEEFWKISAVAAVGIVLIGVLGFLIYLIFEYLL
P

Sequences:

>Translated_81_residues
MAKNEKKTDEKKALPSVQIKKPEITKASVSEFFRKYIRVLKLARRPTKEEFWKISAVAAVGIVLIGVLGFLIYLIFEYLL
P
>Mature_80_residues
AKNEKKTDEKKALPSVQIKKPEITKASVSEFFRKYIRVLKLARRPTKEEFWKISAVAAVGIVLIGVLGFLIYLIFEYLLP

Specific function: Unknown

COG id: COG2443

COG function: function code U; Preprotein translocase subunit Sss1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9311; Mature: 9180

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKNEKKTDEKKALPSVQIKKPEITKASVSEFFRKYIRVLKLARRPTKEEFWKISAVAAV
CCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
GIVLIGVLGFLIYLIFEYLLP
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AKNEKKTDEKKALPSVQIKKPEITKASVSEFFRKYIRVLKLARRPTKEEFWKISAVAAV
CCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
GIVLIGVLGFLIYLIFEYLLP
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA