Click here to switch to the map view.

The map label for this gene is 124486398

Identifier: 124486398

GI number: 124486398

Start: 1614988

End: 1615464

Strand: Reverse

Name: 124486398

Synonym: Mlab_1583

Alternate gene names: NA

Gene position: 1615464-1614988 (Counterclockwise)

Preceding gene: 124486399

Following gene: 124486397

Centisome position: 89.5

GC content: 50.52

Gene sequence:

>477_bases
ATGACTGAATCAAAGTTTGGCAATCACTACTATATCTTAAAGACGACATCCAAGCACGAGCGGACCGTTGCCGATAACAT
CCGCGAGGCAATCGAGAACAATATGACGGACGTCGTCGTCACCGCAGTAGTCGTGCCGGAAGATATCAAAGGCTACGTCT
TCGTGGAGAGTCCCGAAGAGCATGCCAGGATCGAGGAGCTTGTCGAATCGATCGCTCATGCCAGGATCGTTTTAAAGAAT
GAAACATCTCTGGAAGAGATCAAACATTTCCTCGTTCCAAAACCGGCTGTATCCGGTATCGACGAGGGAACCATCGTGGA
ACTGATCGCCGGTCCGTTCAAGGGCGAGAAGGCTGTGGTCAAGCGCGTTGATCACACCAAAGAAGAAATCACTGTTGAAC
TCTACGAATCGATCGTTCCGATCCCGATCACGATTCGCGGCGACAACGTCCGTGTGATCGATCGCAATCAGGATTGA

Upstream 100 bases:

>100_bases
AGTTCTGGAAAATTTCCGCAGTCGCTGCAGTAGGAATCGTACTTATCGGCGTTCTCGGATTTCTGATATATCTGATATTT
GAATATCTCCTTCCATAACT

Downstream 100 bases:

>100_bases
ACCCGGATTTTTCCGCGTGAATGCGGGAAATCCCCATACATTCTCCAATCAATCTCTTTTTCCGGGGACATTTATCCAGT
AGGTTTATGTTCTCAGAGGT

Product: 50S ribosomal protein L24A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MTESKFGNHYYILKTTSKHERTVADNIREAIENNMTDVVVTAVVVPEDIKGYVFVESPEEHARIEELVESIAHARIVLKN
ETSLEEIKHFLVPKPAVSGIDEGTIVELIAGPFKGEKAVVKRVDHTKEEITVELYESIVPIPITIRGDNVRVIDRNQD

Sequences:

>Translated_158_residues
MTESKFGNHYYILKTTSKHERTVADNIREAIENNMTDVVVTAVVVPEDIKGYVFVESPEEHARIEELVESIAHARIVLKN
ETSLEEIKHFLVPKPAVSGIDEGTIVELIAGPFKGEKAVVKRVDHTKEEITVELYESIVPIPITIRGDNVRVIDRNQD
>Mature_157_residues
TESKFGNHYYILKTTSKHERTVADNIREAIENNMTDVVVTAVVVPEDIKGYVFVESPEEHARIEELVESIAHARIVLKNE
TSLEEIKHFLVPKPAVSGIDEGTIVELIAGPFKGEKAVVKRVDHTKEEITVELYESIVPIPITIRGDNVRVIDRNQD

Specific function: Unknown

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR005825
- InterPro:   IPR014723
- InterPro:   IPR011590
- InterPro:   IPR005100
- InterPro:   IPR006645
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF03439 Supt5 [H]

EC number: NA

Molecular weight: Translated: 17801; Mature: 17670

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTESKFGNHYYILKTTSKHERTVADNIREAIENNMTDVVVTAVVVPEDIKGYVFVESPEE
CCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEEEECCHH
HARIEELVESIAHARIVLKNETSLEEIKHFLVPKPAVSGIDEGTIVELIAGPFKGEKAVV
HHHHHHHHHHHHHHEEEEECCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHH
KRVDHTKEEITVELYESIVPIPITIRGDNVRVIDRNQD
HHHHCCHHHHHHHHHHCCCCCEEEEECCCEEEEECCCC
>Mature Secondary Structure 
TESKFGNHYYILKTTSKHERTVADNIREAIENNMTDVVVTAVVVPEDIKGYVFVESPEE
CCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEEEECCHH
HARIEELVESIAHARIVLKNETSLEEIKHFLVPKPAVSGIDEGTIVELIAGPFKGEKAVV
HHHHHHHHHHHHHHEEEEECCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHH
KRVDHTKEEITVELYESIVPIPITIRGDNVRVIDRNQD
HHHHCCHHHHHHHHHHCCCCCEEEEECCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]