| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124486361
Identifier: 124486361
GI number: 124486361
Start: 1581906
End: 1582595
Strand: Reverse
Name: 124486361
Synonym: Mlab_1546
Alternate gene names: NA
Gene position: 1582595-1581906 (Counterclockwise)
Preceding gene: 124486362
Following gene: 124486358
Centisome position: 87.68
GC content: 49.42
Gene sequence:
>690_bases ATGGCAGCTTCACCGATGCAGAATCTCAAGGAGTTGGAGGAGGAGCTTGTCCTTCTCAAAAAGTATCCAAAAGAGGATCT GGAGCGAATCATCAAAGAGATCGGTTTTTCCTGTACCTGCTGCGGGAAATGCTGCACAAAAGCGTTCAACGGTCATGTGT TTCTTCTTGCTGAGGACACCCGCCGTCTGAAAACGTTTTCGCCGGAGTCAATGATCCCGGCACCCGATTTTCCCTACTCG GATCCTTCCGGGAACTTCTATGTGTCGGGCTATGCTCTCAAAACACGGGAGAACGGAGACTGCGTGTTTCTGGATGAAAA TCGACGATGCAAAATCTATGATCAGCGGTTTGCCATCTGCCGGGTGTATCCGTATATGCTTCACCGCGAACCGGATTCCA GGGGTAAAATCGACTGGCGGCAGATCTCCGGTCTCGATGAACACGGAGAGTATGACTGTATCATCTCTGATGAGGAGTGT ACAGAAATTGCCCGGGAGACAATTTCGTATGAGACTGCATTTCTGGAACAGGAGATCGCTTTCCACAAAGCGGTCCTGCA GAAGTTTTCCGACGAAGGTATCCGGTTCGTGAGAAAGGATCACGATCTTCGTGTCCGTGCATTTCTGAAATCAGGAAAAG CGACGGTGTTTGTCTGGGACGGATCGAATCTCGTAAAAGAAGAACTGTAA
Upstream 100 bases:
>100_bases CCTTCTCATCTATATTCTGATCACGGCGGTGGGCTCGGTTGCGGCATTCATCGCTTCGTACTTCGTGTCGGTCAGGCTTT ATGAGAAAAAGGAGTTTTGA
Downstream 100 bases:
>100_bases ATTAGACTTAGGCGGTGTTGGGTGTGGAAACCTAAGAAAAAAACCAACGTGAATCTCCGCGAATAAACGCCAATCGCATT TTCCTTACGCCCGGGTGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MAASPMQNLKELEEELVLLKKYPKEDLERIIKEIGFSCTCCGKCCTKAFNGHVFLLAEDTRRLKTFSPESMIPAPDFPYS DPSGNFYVSGYALKTRENGDCVFLDENRRCKIYDQRFAICRVYPYMLHREPDSRGKIDWRQISGLDEHGEYDCIISDEEC TEIARETISYETAFLEQEIAFHKAVLQKFSDEGIRFVRKDHDLRVRAFLKSGKATVFVWDGSNLVKEEL
Sequences:
>Translated_229_residues MAASPMQNLKELEEELVLLKKYPKEDLERIIKEIGFSCTCCGKCCTKAFNGHVFLLAEDTRRLKTFSPESMIPAPDFPYS DPSGNFYVSGYALKTRENGDCVFLDENRRCKIYDQRFAICRVYPYMLHREPDSRGKIDWRQISGLDEHGEYDCIISDEEC TEIARETISYETAFLEQEIAFHKAVLQKFSDEGIRFVRKDHDLRVRAFLKSGKATVFVWDGSNLVKEEL >Mature_228_residues AASPMQNLKELEEELVLLKKYPKEDLERIIKEIGFSCTCCGKCCTKAFNGHVFLLAEDTRRLKTFSPESMIPAPDFPYSD PSGNFYVSGYALKTRENGDCVFLDENRRCKIYDQRFAICRVYPYMLHREPDSRGKIDWRQISGLDEHGEYDCIISDEECT EIARETISYETAFLEQEIAFHKAVLQKFSDEGIRFVRKDHDLRVRAFLKSGKATVFVWDGSNLVKEEL
Specific function: Unknown
COG id: COG0727
COG function: function code R; Predicted Fe-S-cluster oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26541; Mature: 26410
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: PS00014 ER_TARGET
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAASPMQNLKELEEELVLLKKYPKEDLERIIKEIGFSCTCCGKCCTKAFNGHVFLLAEDT CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEHHHHHHHHCCCEEEEEECCC RRLKTFSPESMIPAPDFPYSDPSGNFYVSGYALKTRENGDCVFLDENRRCKIYDQRFAIC CHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEECCCCCEEEEHHHHHHH RVYPYMLHREPDSRGKIDWRQISGLDEHGEYDCIISDEECTEIARETISYETAFLEQEIA HHHHHHHCCCCCCCCCCCHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHH FHKAVLQKFSDEGIRFVRKDHDLRVRAFLKSGKATVFVWDGSNLVKEEL HHHHHHHHHHHCCHHHHHCCCCCEEEEEECCCCEEEEEECCCHHHHHCC >Mature Secondary Structure AASPMQNLKELEEELVLLKKYPKEDLERIIKEIGFSCTCCGKCCTKAFNGHVFLLAEDT CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEHHHHHHHHCCCEEEEEECCC RRLKTFSPESMIPAPDFPYSDPSGNFYVSGYALKTRENGDCVFLDENRRCKIYDQRFAIC CHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEECCCCCEEEEHHHHHHH RVYPYMLHREPDSRGKIDWRQISGLDEHGEYDCIISDEECTEIARETISYETAFLEQEIA HHHHHHHCCCCCCCCCCCHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHH FHKAVLQKFSDEGIRFVRKDHDLRVRAFLKSGKATVFVWDGSNLVKEEL HHHHHHHHHHHCCHHHHHCCCCCEEEEEECCCCEEEEEECCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA