Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124486344

Identifier: 124486344

GI number: 124486344

Start: 1561599

End: 1562327

Strand: Reverse

Name: 124486344

Synonym: Mlab_1529

Alternate gene names: NA

Gene position: 1562327-1561599 (Counterclockwise)

Preceding gene: 124486345

Following gene: 124486343

Centisome position: 86.56

GC content: 48.15

Gene sequence:

>729_bases
ATGGTAATTTCAATGAGATCTTCTGGTAAAAAAGATGCAGGTGTATCGCCGGTTGTCGGAGTTATGCTTATGCTTGTTGT
GACGATCATTATTGCAGGCATTGTCAGTCTGACTGCTGCCGGTTTTATGGATTCAACCGGTACACAGACAGACGAGCCCC
AAATCGAGTTTGTCGGTCTTTATACTGCAGGATACACCGCAGCAACGGTTAGTAACATTGACAAGCAGACATATCAGACA
GAAGCAGCGGGTCTTTTGTTTAAGGTAGTCGGCGATAAGCCGGTTGATTTGATGAAAATGCACCTCTATCTTGCAAGCGG
CAAGAGTTCCGGCGGCGGGGGGTCTGTTGACCTTGGCTATGATGATCCTGTTTCAACCGCCTATCTTCCCGGAGGCAGTA
CGTGGAATTCAAGACGTCAGATAATTCTCCCTCCGGAATACATGCGAGGCTACCGTATCGTATTGTTTGGCCTGAGTGAA
GATGACCCGAATATTCATAACACGATCGCAGATCCGGGAGATATGTTCGTTGTTTCATGCGAGTATGTCAACCCCTCAAG
TCCAAGCCTTGCAATCGGTCTGAGAAAAGATGATGCAGACGGTAACACCGTCGTTAGCGCAGGAATTGGCGCAAACGGCG
ATGCAATTCTGACACTGAGCAATGCCGAGACCGGGTACGTGTATGTGAGACATACGCTGATCGAATCGGATATGATCGCA
ACGGTTTAA

Upstream 100 bases:

>100_bases
AAAGGACAACCTACGGATTTACCGAAGGGTCATTAGTTCACATAACGGTGATTCATGTTCCCACGGGGACCGTACTCAGT
GACCAGGATGTGAGAGCATT

Downstream 100 bases:

>100_bases
TTCTGATTTGCTCCCAAAACAGATTAACAGGGTGAAGAATGTCCATTCTTCACCAATATTTTTCATCCACAAAAAACTCC
ACATCCCCTTCACTTATGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MVISMRSSGKKDAGVSPVVGVMLMLVVTIIIAGIVSLTAAGFMDSTGTQTDEPQIEFVGLYTAGYTAATVSNIDKQTYQT
EAAGLLFKVVGDKPVDLMKMHLYLASGKSSGGGGSVDLGYDDPVSTAYLPGGSTWNSRRQIILPPEYMRGYRIVLFGLSE
DDPNIHNTIADPGDMFVVSCEYVNPSSPSLAIGLRKDDADGNTVVSAGIGANGDAILTLSNAETGYVYVRHTLIESDMIA
TV

Sequences:

>Translated_242_residues
MVISMRSSGKKDAGVSPVVGVMLMLVVTIIIAGIVSLTAAGFMDSTGTQTDEPQIEFVGLYTAGYTAATVSNIDKQTYQT
EAAGLLFKVVGDKPVDLMKMHLYLASGKSSGGGGSVDLGYDDPVSTAYLPGGSTWNSRRQIILPPEYMRGYRIVLFGLSE
DDPNIHNTIADPGDMFVVSCEYVNPSSPSLAIGLRKDDADGNTVVSAGIGANGDAILTLSNAETGYVYVRHTLIESDMIA
TV
>Mature_242_residues
MVISMRSSGKKDAGVSPVVGVMLMLVVTIIIAGIVSLTAAGFMDSTGTQTDEPQIEFVGLYTAGYTAATVSNIDKQTYQT
EAAGLLFKVVGDKPVDLMKMHLYLASGKSSGGGGSVDLGYDDPVSTAYLPGGSTWNSRRQIILPPEYMRGYRIVLFGLSE
DDPNIHNTIADPGDMFVVSCEYVNPSSPSLAIGLRKDDADGNTVVSAGIGANGDAILTLSNAETGYVYVRHTLIESDMIA
TV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25486; Mature: 25486

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVISMRSSGKKDAGVSPVVGVMLMLVVTIIIAGIVSLTAAGFMDSTGTQTDEPQIEFVGL
CEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEE
YTAGYTAATVSNIDKQTYQTEAAGLLFKVVGDKPVDLMKMHLYLASGKSSGGGGSVDLGY
EECCCHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHEEEEEEEECCCCCCCCCEEECCC
DDPVSTAYLPGGSTWNSRRQIILPPEYMRGYRIVLFGLSEDDPNIHNTIADPGDMFVVSC
CCCCCEEEECCCCCCCCCCEEEECHHHHCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEE
EYVNPSSPSLAIGLRKDDADGNTVVSAGIGANGDAILTLSNAETGYVYVRHTLIESDMIA
EEECCCCCCEEEEEECCCCCCCEEEEECCCCCCCEEEEECCCCCCEEEEEEEEECCCCEE
TV
CC
>Mature Secondary Structure
MVISMRSSGKKDAGVSPVVGVMLMLVVTIIIAGIVSLTAAGFMDSTGTQTDEPQIEFVGL
CEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEE
YTAGYTAATVSNIDKQTYQTEAAGLLFKVVGDKPVDLMKMHLYLASGKSSGGGGSVDLGY
EECCCHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHEEEEEEEECCCCCCCCCEEECCC
DDPVSTAYLPGGSTWNSRRQIILPPEYMRGYRIVLFGLSEDDPNIHNTIADPGDMFVVSC
CCCCCEEEECCCCCCCCCCEEEECHHHHCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEE
EYVNPSSPSLAIGLRKDDADGNTVVSAGIGANGDAILTLSNAETGYVYVRHTLIESDMIA
EEECCCCCCEEEEEECCCCCCCEEEEECCCCCCCEEEEECCCCCCEEEEEEEEECCCCEE
TV
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA