Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124486345

Identifier: 124486345

GI number: 124486345

Start: 1562321

End: 1563028

Strand: Reverse

Name: 124486345

Synonym: Mlab_1530

Alternate gene names: NA

Gene position: 1563028-1562321 (Counterclockwise)

Preceding gene: 124486346

Following gene: 124486344

Centisome position: 86.6

GC content: 47.46

Gene sequence:

>708_bases
ATGCGAACAGATAATGAAAAAAACGATGGGGTTTCCCCTGTTGTCGGTGTTATGCTGATGCTGGTTGTAACAATCATTGT
TGCAGCATTGGTCGCAGCATTTGCCGGGGGTCTTGGCTCTGCAGCTACCCCTGCCCCTTCCGCAGGCTTTGACTTCACCA
TTCATGCCGGCGGCCAAACGAGTTCCTATCCGGGAGTTGTATGTGAAATCCCGGTTGCTACTGGAGAATTCACCTCAAAT
CAGTTGGAAATTATTACGACTTATGTTGTTCCAGACACCTACAACGGGGTTCCCCTCACGAATGCAGGAAAGACTATCAC
CCATACTATCACTGGACAGGTCGAGGATTACGGCGTTGATTTAAACGGTGGAACTGCCAGGATCGATTGGGCTTTATCAC
CACTTTATTCTGCATCTGATGATCCCTTTGTTCCAAAAACACAGGTTTATAATGAGCCAATTGTCGCAACCACCGGAAAT
GGTTTAACATGGGGCTATGGCATGAATGATTTACTCTACTTTGGCGGTAATGCACCCATCGCAAGCGGTACAATTTGGTG
GTTTAAGGAGATCGACCGATTCCTTGGTTTCCCAACTACCGAAAGGACAACCTACGGATTTACCGAAGGGTCATTAGTTC
ACATAACGGTGATTCATGTTCCCACGGGGACCGTACTCAGTGACCAGGATGTGAGAGCATTATGGTAA

Upstream 100 bases:

>100_bases
TCAGGAACATGTTCCGGTAACCTATACGATATTCGACACAATTACCGGCAAGCAGATCCAGAAAGGAACAATCACCATTA
ACTGAATGGAGGTGAAGAGA

Downstream 100 bases:

>100_bases
TTTCAATGAGATCTTCTGGTAAAAAAGATGCAGGTGTATCGCCGGTTGTCGGAGTTATGCTTATGCTTGTTGTGACGATC
ATTATTGCAGGCATTGTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MRTDNEKNDGVSPVVGVMLMLVVTIIVAALVAAFAGGLGSAATPAPSAGFDFTIHAGGQTSSYPGVVCEIPVATGEFTSN
QLEIITTYVVPDTYNGVPLTNAGKTITHTITGQVEDYGVDLNGGTARIDWALSPLYSASDDPFVPKTQVYNEPIVATTGN
GLTWGYGMNDLLYFGGNAPIASGTIWWFKEIDRFLGFPTTERTTYGFTEGSLVHITVIHVPTGTVLSDQDVRALW

Sequences:

>Translated_235_residues
MRTDNEKNDGVSPVVGVMLMLVVTIIVAALVAAFAGGLGSAATPAPSAGFDFTIHAGGQTSSYPGVVCEIPVATGEFTSN
QLEIITTYVVPDTYNGVPLTNAGKTITHTITGQVEDYGVDLNGGTARIDWALSPLYSASDDPFVPKTQVYNEPIVATTGN
GLTWGYGMNDLLYFGGNAPIASGTIWWFKEIDRFLGFPTTERTTYGFTEGSLVHITVIHVPTGTVLSDQDVRALW
>Mature_235_residues
MRTDNEKNDGVSPVVGVMLMLVVTIIVAALVAAFAGGLGSAATPAPSAGFDFTIHAGGQTSSYPGVVCEIPVATGEFTSN
QLEIITTYVVPDTYNGVPLTNAGKTITHTITGQVEDYGVDLNGGTARIDWALSPLYSASDDPFVPKTQVYNEPIVATTGN
GLTWGYGMNDLLYFGGNAPIASGTIWWFKEIDRFLGFPTTERTTYGFTEGSLVHITVIHVPTGTVLSDQDVRALW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24914; Mature: 24914

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTDNEKNDGVSPVVGVMLMLVVTIIVAALVAAFAGGLGSAATPAPSAGFDFTIHAGGQT
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCC
SSYPGVVCEIPVATGEFTSNQLEIITTYVVPDTYNGVPLTNAGKTITHTITGQVEDYGVD
CCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCEECCCCCEEEEEEECCEEEEEEE
LNGGTARIDWALSPLYSASDDPFVPKTQVYNEPIVATTGNGLTWGYGMNDLLYFGGNAPI
ECCCEEEEEEEECCCCCCCCCCCCCCHHHCCCCEEEECCCCEEECCCCCEEEEECCCCCC
ASGTIWWFKEIDRFLGFPTTERTTYGFTEGSLVHITVIHVPTGTVLSDQDVRALW
CCCEEHHHHHHHHHHCCCCCCCEEECCCCCCEEEEEEEEECCCCEECCCCCCCCC
>Mature Secondary Structure
MRTDNEKNDGVSPVVGVMLMLVVTIIVAALVAAFAGGLGSAATPAPSAGFDFTIHAGGQT
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCC
SSYPGVVCEIPVATGEFTSNQLEIITTYVVPDTYNGVPLTNAGKTITHTITGQVEDYGVD
CCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCEECCCCCEEEEEEECCEEEEEEE
LNGGTARIDWALSPLYSASDDPFVPKTQVYNEPIVATTGNGLTWGYGMNDLLYFGGNAPI
ECCCEEEEEEEECCCCCCCCCCCCCCHHHCCCCEEEECCCCEEECCCCCEEEEECCCCCC
ASGTIWWFKEIDRFLGFPTTERTTYGFTEGSLVHITVIHVPTGTVLSDQDVRALW
CCCEEHHHHHHHHHHCCCCCCCEEECCCCCCEEEEEEEEECCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA