Click here to switch to the map view.

The map label for this gene is 124486327

Identifier: 124486327

GI number: 124486327

Start: 1547971

End: 1548276

Strand: Reverse

Name: 124486327

Synonym: Mlab_1512

Alternate gene names: NA

Gene position: 1548276-1547971 (Counterclockwise)

Preceding gene: 124486328

Following gene: 124486326

Centisome position: 85.78

GC content: 48.37

Gene sequence:

>306_bases
GTGAAATTTGCAGGGAATGTTGTATCCCGTCTTGGGCGACGGTTGCTGATTGTTGAAAGTGATGCTGGTCAGCTTCCTCC
GCTTTATACGGAGGTTGCAGATGAACAAAGCAGATCAGTTGGTAAAATTGTTGACCTCTACGGGAGCGTTTCAAGACCGT
ATCTGACTGTGTTATGCAGCACCGATTCGTCTGCCGGTGTACATGCAGGAGACAAACTGTATGTCATCCCCGAAACCAGG
CCTGAAAAACCCAGAAAAACTTCACCTCACAAATATGGCCGCGATATGCGCGCAAATCGGCGTTAA

Upstream 100 bases:

>100_bases
TTATAGTACTTCTTACGCATTATATTATGCATAAATACTCTGTGGTTTGCATTCCACGGGTTTGCTTGACTCTCTATTTG
TAGTCATCGAGGTTTGATTT

Downstream 100 bases:

>100_bases
TCCGTAGATTAAAAGGATCTTATAATCATGGAAACTGAAATTGAAAAACTGAAACAGCTACGAGCAGATAGAGAAAAAAT
GAAACAGCGTCAGGAAACGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MKFAGNVVSRLGRRLLIVESDAGQLPPLYTEVADEQSRSVGKIVDLYGSVSRPYLTVLCSTDSSAGVHAGDKLYVIPETR
PEKPRKTSPHKYGRDMRANRR

Sequences:

>Translated_101_residues
MKFAGNVVSRLGRRLLIVESDAGQLPPLYTEVADEQSRSVGKIVDLYGSVSRPYLTVLCSTDSSAGVHAGDKLYVIPETR
PEKPRKTSPHKYGRDMRANRR
>Mature_101_residues
MKFAGNVVSRLGRRLLIVESDAGQLPPLYTEVADEQSRSVGKIVDLYGSVSRPYLTVLCSTDSSAGVHAGDKLYVIPETR
PEKPRKTSPHKYGRDMRANRR

Specific function: Unknown

COG id: COG3277

COG function: function code J; RNA-binding protein involved in rRNA processing

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11217; Mature: 11217

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFAGNVVSRLGRRLLIVESDAGQLPPLYTEVADEQSRSVGKIVDLYGSVSRPYLTVLCS
CCCCCHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCCEEEEEEC
TDSSAGVHAGDKLYVIPETRPEKPRKTSPHKYGRDMRANRR
CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKFAGNVVSRLGRRLLIVESDAGQLPPLYTEVADEQSRSVGKIVDLYGSVSRPYLTVLCS
CCCCCHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCCEEEEEEC
TDSSAGVHAGDKLYVIPETRPEKPRKTSPHKYGRDMRANRR
CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA