Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124486328

Identifier: 124486328

GI number: 124486328

Start: 1548406

End: 1549050

Strand: Reverse

Name: 124486328

Synonym: Mlab_1513

Alternate gene names: NA

Gene position: 1549050-1548406 (Counterclockwise)

Preceding gene: 124486329

Following gene: 124486327

Centisome position: 85.82

GC content: 53.8

Gene sequence:

>645_bases
ATGTACGATTTCCACTGTCATACAACGATGAGCGACGGCGAACTGATCCCGACCGAACTGATCCGCCGGATGGCAGTTGC
CGGATATACGGAGATGGCGATTGCCGATCATGCGGATTTCTCCAATGTGGAATTGCTTATACAGTCTCAGGAAAAAGTAA
AGCGGTCTGCAGCATTGTATGGAGTAAGGCTTTTTACCGGTGTCGAGATCACGCACGTACCTCCGGCCGAGATCGCCGAC
CTTGCGAAGTATGCCAGATCTCTCGGTGCGGAAGTTGTGATCGTCCACGGTGAAACGATCACGGAGCCGGTTGCTCCCGG
GACAAATCTGGCGGCAGTGACCTGTCCCGATGTGGATATTCTGGCTCACCCTGGAATGATCTCCGAGGAAGAGGCTTTGC
TTGCAGCAAAGAACGGTGTGTTTCTGGAGATCACGTCAAGGAACGGGCACAATAAGGCAAATGGCCACGTTCTTGCGTCT
GCGCGCCGCGCGGGAGCCGGTGTTGTGGTTCAGTCGGACATTCACGGCCCGGATGATATAATTAACGAAAAAATGCGCGG
TCTGGTCGCTCGAGGGGCAGGTATGAGCGAAGACGAGGCAGAAATGGTTCTTTCCCTCACTTCCGCAGAGATTCTTTCTC
TCTAA

Upstream 100 bases:

>100_bases
CGCAGTGGTATAAGGCCGGCGGACGTATTCGCGTGGAGTATGCCGGATCCAAAGAAGATCTTCTGAGAAGCGTCGCCGGA
AAACTCGGCGGGAAGTAAGC

Downstream 100 bases:

>100_bases
TTTATATTTTAGTATTGTGGGGAATGTATTTATAGTACTTCTTACGCATTATATTATGCATAAATACTCTGTGGTTTGCA
TTCCACGGGTTTGCTTGACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MYDFHCHTTMSDGELIPTELIRRMAVAGYTEMAIADHADFSNVELLIQSQEKVKRSAALYGVRLFTGVEITHVPPAEIAD
LAKYARSLGAEVVIVHGETITEPVAPGTNLAAVTCPDVDILAHPGMISEEEALLAAKNGVFLEITSRNGHNKANGHVLAS
ARRAGAGVVVQSDIHGPDDIINEKMRGLVARGAGMSEDEAEMVLSLTSAEILSL

Sequences:

>Translated_214_residues
MYDFHCHTTMSDGELIPTELIRRMAVAGYTEMAIADHADFSNVELLIQSQEKVKRSAALYGVRLFTGVEITHVPPAEIAD
LAKYARSLGAEVVIVHGETITEPVAPGTNLAAVTCPDVDILAHPGMISEEEALLAAKNGVFLEITSRNGHNKANGHVLAS
ARRAGAGVVVQSDIHGPDDIINEKMRGLVARGAGMSEDEAEMVLSLTSAEILSL
>Mature_214_residues
MYDFHCHTTMSDGELIPTELIRRMAVAGYTEMAIADHADFSNVELLIQSQEKVKRSAALYGVRLFTGVEITHVPPAEIAD
LAKYARSLGAEVVIVHGETITEPVAPGTNLAAVTCPDVDILAHPGMISEEEALLAAKNGVFLEITSRNGHNKANGHVLAS
ARRAGAGVVVQSDIHGPDDIINEKMRGLVARGAGMSEDEAEMVLSLTSAEILSL

Specific function: Unknown

COG id: COG1387

COG function: function code ER; Histidinol phosphatase and related hydrolases of the PHP family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 22796; Mature: 22796

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYDFHCHTTMSDGELIPTELIRRMAVAGYTEMAIADHADFSNVELLIQSQEKVKRSAALY
CCEEEEECCCCCCCCCHHHHHHHHHHCCCHHHEEECCCCCCCEEEEEECHHHHHHHHHHH
GVRLFTGVEITHVPPAEIADLAKYARSLGAEVVIVHGETITEPVAPGTNLAAVTCPDVDI
EEEEHCCEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCE
LAHPGMISEEEALLAAKNGVFLEITSRNGHNKANGHVLASARRAGAGVVVQSDIHGPDDI
EECCCCCCCCCHHEEECCCEEEEEECCCCCCCCCCEEEEECCCCCCCEEEECCCCCCHHH
INEKMRGLVARGAGMSEDEAEMVLSLTSAEILSL
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYDFHCHTTMSDGELIPTELIRRMAVAGYTEMAIADHADFSNVELLIQSQEKVKRSAALY
CCEEEEECCCCCCCCCHHHHHHHHHHCCCHHHEEECCCCCCCEEEEEECHHHHHHHHHHH
GVRLFTGVEITHVPPAEIADLAKYARSLGAEVVIVHGETITEPVAPGTNLAAVTCPDVDI
EEEEHCCEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCE
LAHPGMISEEEALLAAKNGVFLEITSRNGHNKANGHVLASARRAGAGVVVQSDIHGPDDI
EECCCCCCCCCHHEEECCCEEEEEECCCCCCCCCCEEEEECCCCCCCEEEECCCCCCHHH
INEKMRGLVARGAGMSEDEAEMVLSLTSAEILSL
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]