Click here to switch to the map view.

The map label for this gene is ftsY [C]

Identifier: 124486291

GI number: 124486291

Start: 1513471

End: 1514484

Strand: Reverse

Name: ftsY [C]

Synonym: Mlab_1475

Alternate gene names: 124486291

Gene position: 1514484-1513471 (Counterclockwise)

Preceding gene: 124486293

Following gene: 124486290

Centisome position: 83.91

GC content: 52.56

Gene sequence:

>1014_bases
ATGTTTGAAGGACTGAAAAATAAGCTCGGTCTCGGGAAAAAAAAGAACCCGATTCCGGAGACGGAAGCGCCCGTTCCTGC
CGCCGTCGAAACAATACCATCACCCCAGCCTGAGGAGAAAAAAGCCCCGGGCTTCCTCAATAAAATCAAAACCCTTGTTG
TAGAACACGAGTTTGTCCTCTCCGAAAAAGATATCGAGGAATCCCTCTTCGAACTCCAGATGGTCCTCCTGGAGTCCGAT
GTCGCTTATCCGGTAGCCGAGGCGATCACCGAACATATGAAAAAAGAGCTCGTCGGCACTCACAGAAAACTTCGCGAATC
GGCCGATGATGTTGTCACGAACGCTCTTCGGCATGCAATCGAAGAGGTTCTCGGCGAGGGTTTCGATCTCGTATCCTATG
TCAGAACGCATGACCGTCCGGTCAAGATCCTCTTCACTGGGGTGAACGGGACCGGAAAAACCACCTCGGTCGCCAAGATC
GCCCACTATCTTCAGAGTCAGGGCCTCTCCGTCGTGGTCGGAGCAGGTGATACGTTCCGTGCCGGGGCCATCGAACAGAT
CCGTGTCCACTGTGACCGGCTCGGGATCAAACTCATCGCCCATCAGGAAGGAGCCGATCCCTCGGCCGTTCTCTACGACA
CCGTCGAGTATGCCAAAGCCCACAAAACCGACGTTGTCCTCGCCGATTCGGCAGGAAGATTCCACAACCGGGTCAATCTC
ATGAACCAGCTTGAAAAAATCAAGCGGGTCATGAAACCCGATCTCGTCTTCTATGTCGATGAGGCCGTTGCCGGAAACGA
TGCCGTTATTCGTGCCGAAGAGTTTGAAAAAACCGTCTCCACAGACGGGGTCATTCTCACCAAAGTCGACATGGATCCAA
AAGGCGGTGCTGCAATTTCGATCGCCTACACGATCGGAAAACCGCTTGTTTTCCTCGGAGTCGGGCAGGGGTATGACGAT
ATGAAACCATTCACTCCTTCGCTGATTATTGATGAAATATTCGGAGATGACTAA

Upstream 100 bases:

>100_bases
TTTGATATCATTATATTCCAGTCATCAGTCTAAGTTAATATAGCATTCCCTCAGGTCTAACAGAGAGGAATTTATATTCA
CAGGACCGAATTAATAGATA

Downstream 100 bases:

>100_bases
CATGGGACTTGATACACTTTCCAACTCACTCAAAGACGCGATGAAAAAACTCGCCGGCAAAACTGTCATCGACCGTGCTG
CCGTCGACGAACTCGTTCGC

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MFEGLKNKLGLGKKKNPIPETEAPVPAAVETIPSPQPEEKKAPGFLNKIKTLVVEHEFVLSEKDIEESLFELQMVLLESD
VAYPVAEAITEHMKKELVGTHRKLRESADDVVTNALRHAIEEVLGEGFDLVSYVRTHDRPVKILFTGVNGTGKTTSVAKI
AHYLQSQGLSVVVGAGDTFRAGAIEQIRVHCDRLGIKLIAHQEGADPSAVLYDTVEYAKAHKTDVVLADSAGRFHNRVNL
MNQLEKIKRVMKPDLVFYVDEAVAGNDAVIRAEEFEKTVSTDGVILTKVDMDPKGGAAISIAYTIGKPLVFLGVGQGYDD
MKPFTPSLIIDEIFGDD

Sequences:

>Translated_337_residues
MFEGLKNKLGLGKKKNPIPETEAPVPAAVETIPSPQPEEKKAPGFLNKIKTLVVEHEFVLSEKDIEESLFELQMVLLESD
VAYPVAEAITEHMKKELVGTHRKLRESADDVVTNALRHAIEEVLGEGFDLVSYVRTHDRPVKILFTGVNGTGKTTSVAKI
AHYLQSQGLSVVVGAGDTFRAGAIEQIRVHCDRLGIKLIAHQEGADPSAVLYDTVEYAKAHKTDVVLADSAGRFHNRVNL
MNQLEKIKRVMKPDLVFYVDEAVAGNDAVIRAEEFEKTVSTDGVILTKVDMDPKGGAAISIAYTIGKPLVFLGVGQGYDD
MKPFTPSLIIDEIFGDD
>Mature_337_residues
MFEGLKNKLGLGKKKNPIPETEAPVPAAVETIPSPQPEEKKAPGFLNKIKTLVVEHEFVLSEKDIEESLFELQMVLLESD
VAYPVAEAITEHMKKELVGTHRKLRESADDVVTNALRHAIEEVLGEGFDLVSYVRTHDRPVKILFTGVNGTGKTTSVAKI
AHYLQSQGLSVVVGAGDTFRAGAIEQIRVHCDRLGIKLIAHQEGADPSAVLYDTVEYAKAHKTDVVLADSAGRFHNRVNL
MNQLEKIKRVMKPDLVFYVDEAVAGNDAVIRAEEFEKTVSTDGVILTKVDMDPKGGAAISIAYTIGKPLVFLGVGQGYDD
MKPFTPSLIIDEIFGDD

Specific function: Probably involved in the signal sequence recognition [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI295424842, Length=333, Percent_Identity=31.8318318318318, Blast_Score=168, Evalue=8e-42,
Organism=Homo sapiens, GI23308697, Length=333, Percent_Identity=31.8318318318318, Blast_Score=168, Evalue=8e-42,
Organism=Homo sapiens, GI4507215, Length=280, Percent_Identity=27.8571428571429, Blast_Score=129, Evalue=4e-30,
Organism=Homo sapiens, GI226371618, Length=204, Percent_Identity=29.9019607843137, Blast_Score=122, Evalue=4e-28,
Organism=Homo sapiens, GI89061728, Length=130, Percent_Identity=29.2307692307692, Blast_Score=75, Evalue=6e-14,
Organism=Escherichia coli, GI1789874, Length=202, Percent_Identity=42.5742574257426, Blast_Score=170, Evalue=1e-43,
Organism=Escherichia coli, GI1788963, Length=277, Percent_Identity=31.7689530685921, Blast_Score=151, Evalue=5e-38,
Organism=Caenorhabditis elegans, GI193206261, Length=319, Percent_Identity=33.5423197492163, Blast_Score=160, Evalue=7e-40,
Organism=Caenorhabditis elegans, GI17539958, Length=282, Percent_Identity=28.0141843971631, Blast_Score=130, Evalue=1e-30,
Organism=Saccharomyces cerevisiae, GI6325345, Length=265, Percent_Identity=28.3018867924528, Blast_Score=135, Evalue=1e-32,
Organism=Saccharomyces cerevisiae, GI6320498, Length=339, Percent_Identity=27.1386430678466, Blast_Score=130, Evalue=2e-31,
Organism=Drosophila melanogaster, GI24641198, Length=328, Percent_Identity=31.4024390243902, Blast_Score=164, Evalue=8e-41,
Organism=Drosophila melanogaster, GI17647949, Length=282, Percent_Identity=25.531914893617, Blast_Score=119, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 36874; Mature: 36874

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEGLKNKLGLGKKKNPIPETEAPVPAAVETIPSPQPEEKKAPGFLNKIKTLVVEHEFVL
CCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
SEKDIEESLFELQMVLLESDVAYPVAEAITEHMKKELVGTHRKLRESADDVVTNALRHAI
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEVLGEGFDLVSYVRTHDRPVKILFTGVNGTGKTTSVAKIAHYLQSQGLSVVVGAGDTFR
HHHHCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCC
AGAIEQIRVHCDRLGIKLIAHQEGADPSAVLYDTVEYAKAHKTDVVLADSAGRFHNRVNL
CCHHHHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHH
MNQLEKIKRVMKPDLVFYVDEAVAGNDAVIRAEEFEKTVSTDGVILTKVDMDPKGGAAIS
HHHHHHHHHHHCCCEEEEEECCCCCCCCEEEHHHHHHHHCCCCEEEEEECCCCCCCCEEE
IAYTIGKPLVFLGVGQGYDDMKPFTPSLIIDEIFGDD
EEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MFEGLKNKLGLGKKKNPIPETEAPVPAAVETIPSPQPEEKKAPGFLNKIKTLVVEHEFVL
CCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
SEKDIEESLFELQMVLLESDVAYPVAEAITEHMKKELVGTHRKLRESADDVVTNALRHAI
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEVLGEGFDLVSYVRTHDRPVKILFTGVNGTGKTTSVAKIAHYLQSQGLSVVVGAGDTFR
HHHHCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCC
AGAIEQIRVHCDRLGIKLIAHQEGADPSAVLYDTVEYAKAHKTDVVLADSAGRFHNRVNL
CCHHHHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHH
MNQLEKIKRVMKPDLVFYVDEAVAGNDAVIRAEEFEKTVSTDGVILTKVDMDPKGGAAIS
HHHHHHHHHHHCCCEEEEEECCCCCCCCEEEHHHHHHHHCCCCEEEEEECCCCCCCCEEE
IAYTIGKPLVFLGVGQGYDDMKPFTPSLIIDEIFGDD
EEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]