| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124486285
Identifier: 124486285
GI number: 124486285
Start: 1508043
End: 1508861
Strand: Reverse
Name: 124486285
Synonym: Mlab_1469
Alternate gene names: NA
Gene position: 1508861-1508043 (Counterclockwise)
Preceding gene: 124486286
Following gene: 124486284
Centisome position: 83.6
GC content: 47.86
Gene sequence:
>819_bases GTGATGATGGCCACAAAAAATGATTCCGGTCTTTCCATGGCGGTTGGTTTTGTGATGGTCTTATTGGTCATCGCGATGAT CATCGGGATGTGGGCGGTCATCGGCGTGCCTGAGCAGATCAGGGATGCGGAGGATTATCATGCTATTGAGGTGACGAATT CTTTCCTTGACTACAAAATTGCTGTTGATAATCAGCGTGTTCATGACATGACCGGATTGAACATCAGTATGCTGATTCCT GCCGCATCTGCCTATGCCGACGGGGCCCTCTTTATGGAGGAGGATGTGGGGACTCTCCGTATTCTGCTTGGCAGCACCGA AAATACATATGATATCAGCAGGTTGTATACAACATTTGGGACGACGAATACCCGGGTCGGTTACGAAGGGGGCGGCGTAT TTCGAAACGATTACGGCTCCGCTGTGTGGGTGACACCGCCATCAATCAATATAGATAAAGACGGGTCTGATCTTGATATC ACAATGATAGTTCCGGAAATGCATGGTGTTTTTGCTGTTGGAAGTTCCGAAGGAATTCCGGTGGAGACAGGTCTTGTCTC TTCTATCTCAACCTATGTGAATGCGCCGCAGGATCAGATGCTCACTATAACTTATACCGCTGAAAAGCAGTGGGATGCTG TCCTTTGGAGCACCTTTTTCAACGAAACACAGATACTATATCAGAGCGAAGGTGTATCTATCACAAGTACGATGCCGTCA CCGATAACAGCTACTCTGCAAATAACTCCGCCGCCGGGAGGGGTGATTTATCTTACGGTCATCAAGCCAGTCTATGATGT CGATGTCAGGAGATATTAG
Upstream 100 bases:
>100_bases CTGGTGTTGCCACGTTGAATTACCGGCTGAAAGAAATCATCGATCCGACCCCGGGTTCTTCAGATGTAGATCATTTATGC GTATTTACTATGGGGTTGCA
Downstream 100 bases:
>100_bases ATATGAAAAATGAATTCGGTGTTTCCAGTGTTGTCGGTGTTGTTCTTCTCTTGCTTCTGGTTGTTCTCGCAGCTTCCGTT ATCGGTCTGACCCTTTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MMMATKNDSGLSMAVGFVMVLLVIAMIIGMWAVIGVPEQIRDAEDYHAIEVTNSFLDYKIAVDNQRVHDMTGLNISMLIP AASAYADGALFMEEDVGTLRILLGSTENTYDISRLYTTFGTTNTRVGYEGGGVFRNDYGSAVWVTPPSINIDKDGSDLDI TMIVPEMHGVFAVGSSEGIPVETGLVSSISTYVNAPQDQMLTITYTAEKQWDAVLWSTFFNETQILYQSEGVSITSTMPS PITATLQITPPPGGVIYLTVIKPVYDVDVRRY
Sequences:
>Translated_272_residues MMMATKNDSGLSMAVGFVMVLLVIAMIIGMWAVIGVPEQIRDAEDYHAIEVTNSFLDYKIAVDNQRVHDMTGLNISMLIP AASAYADGALFMEEDVGTLRILLGSTENTYDISRLYTTFGTTNTRVGYEGGGVFRNDYGSAVWVTPPSINIDKDGSDLDI TMIVPEMHGVFAVGSSEGIPVETGLVSSISTYVNAPQDQMLTITYTAEKQWDAVLWSTFFNETQILYQSEGVSITSTMPS PITATLQITPPPGGVIYLTVIKPVYDVDVRRY >Mature_272_residues MMMATKNDSGLSMAVGFVMVLLVIAMIIGMWAVIGVPEQIRDAEDYHAIEVTNSFLDYKIAVDNQRVHDMTGLNISMLIP AASAYADGALFMEEDVGTLRILLGSTENTYDISRLYTTFGTTNTRVGYEGGGVFRNDYGSAVWVTPPSINIDKDGSDLDI TMIVPEMHGVFAVGSSEGIPVETGLVSSISTYVNAPQDQMLTITYTAEKQWDAVLWSTFFNETQILYQSEGVSITSTMPS PITATLQITPPPGGVIYLTVIKPVYDVDVRRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29713; Mature: 29713
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: PS00079 MULTICOPPER_OXIDASE1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMMATKNDSGLSMAVGFVMVLLVIAMIIGMWAVIGVPEQIRDAEDYHAIEVTNSFLDYKI CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCEEEEEECCEEEEEE AVDNQRVHDMTGLNISMLIPAASAYADGALFMEEDVGTLRILLGSTENTYDISRLYTTFG EECCCEEEHCCCCEEEEEEECCHHCCCCEEEEECCCCEEEEEEECCCCCEEHHHEEEECC TTNTRVGYEGGGVFRNDYGSAVWVTPPSINIDKDGSDLDITMIVPEMHGVFAVGSSEGIP CCCCEEEECCCCEEECCCCCEEEEECCCCEECCCCCCEEEEEEEECCCCEEEECCCCCCE VETGLVSSISTYVNAPQDQMLTITYTAEKQWDAVLWSTFFNETQILYQSEGVSITSTMPS ECCCHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCEEEEEECCCCEEEECCCC PITATLQITPPPGGVIYLTVIKPVYDVDVRRY CEEEEEEEECCCCCEEEEEEECCEECCCEECC >Mature Secondary Structure MMMATKNDSGLSMAVGFVMVLLVIAMIIGMWAVIGVPEQIRDAEDYHAIEVTNSFLDYKI CEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCEEEEEECCEEEEEE AVDNQRVHDMTGLNISMLIPAASAYADGALFMEEDVGTLRILLGSTENTYDISRLYTTFG EECCCEEEHCCCCEEEEEEECCHHCCCCEEEEECCCCEEEEEEECCCCCEEHHHEEEECC TTNTRVGYEGGGVFRNDYGSAVWVTPPSINIDKDGSDLDITMIVPEMHGVFAVGSSEGIP CCCCEEEECCCCEEECCCCCEEEEECCCCEECCCCCCEEEEEEEECCCCEEEECCCCCCE VETGLVSSISTYVNAPQDQMLTITYTAEKQWDAVLWSTFFNETQILYQSEGVSITSTMPS ECCCHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCEEEEEECCCCEEEECCCC PITATLQITPPPGGVIYLTVIKPVYDVDVRRY CEEEEEEEECCCCCEEEEEEECCEECCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA