| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124486286
Identifier: 124486286
GI number: 124486286
Start: 1508858
End: 1509496
Strand: Reverse
Name: 124486286
Synonym: Mlab_1470
Alternate gene names: NA
Gene position: 1509496-1508858 (Counterclockwise)
Preceding gene: 124486287
Following gene: 124486285
Centisome position: 83.63
GC content: 46.79
Gene sequence:
>639_bases ATGAACAAAAATGCCGATTCCGGTCTTTCGGAAGTTGTCAGTGTGGCGCTGATTTTAACCGTCCTTATTCTTGTTATAAT AATGTGGGTGCTGATTGCTTTTCCGATAATGGGAACTAATGCCGAACAGGTGCATAACGGTGATGTTTTTCTTGAGTTTG CCCAGATGAAAGCTGATGTGGATACCGTCTGGTTGTCGAACTCCACTGGTATCACCCGGCAGGCGGTTTTTACGCTATCC CCTGCAGCTGATCGAACCGAAGTCACGGTCTTTCCAAATCTTTTGCTGGCCGCGTCATTTGGCACGGTAACTCTGCAATA CGGCAGTATGTATACGCGTGGAAGCGAAACGTATGCTACAGTGGAGATCCTCTACACTTCTTCTAACATGTATGCTGAAG AAATCAATATCCTCTATGACGGCGGCACTCTTTCTCAGAATGATCGTGTTATTCTTTCCGGTTCTGATTTTGGATCGGGG AGCTATGTCGTTGTAGTTAATACTGCCGACGTTCCCGAGACAGTCATCGGCGGCTCTGGTGTTGCCACGTTGAATTACCG GCTGAAAGAAATCATCGATCCGACCCCGGGTTCTTCAGATGTAGATCATTTATGCGTATTTACTATGGGGTTGCAGTGA
Upstream 100 bases:
>100_bases CATTATACCAGCCAGATCCGGATAATCCCTGGAACGATTTTGTCGGAACATTCGATACCGTTACCGTGGTCAAGTATGAG GTTGCGGCAGGAGGTCCTCA
Downstream 100 bases:
>100_bases TGATGGCCACAAAAAATGATTCCGGTCTTTCCATGGCGGTTGGTTTTGTGATGGTCTTATTGGTCATCGCGATGATCATC GGGATGTGGGCGGTCATCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MNKNADSGLSEVVSVALILTVLILVIIMWVLIAFPIMGTNAEQVHNGDVFLEFAQMKADVDTVWLSNSTGITRQAVFTLS PAADRTEVTVFPNLLLAASFGTVTLQYGSMYTRGSETYATVEILYTSSNMYAEEINILYDGGTLSQNDRVILSGSDFGSG SYVVVVNTADVPETVIGGSGVATLNYRLKEIIDPTPGSSDVDHLCVFTMGLQ
Sequences:
>Translated_212_residues MNKNADSGLSEVVSVALILTVLILVIIMWVLIAFPIMGTNAEQVHNGDVFLEFAQMKADVDTVWLSNSTGITRQAVFTLS PAADRTEVTVFPNLLLAASFGTVTLQYGSMYTRGSETYATVEILYTSSNMYAEEINILYDGGTLSQNDRVILSGSDFGSG SYVVVVNTADVPETVIGGSGVATLNYRLKEIIDPTPGSSDVDHLCVFTMGLQ >Mature_212_residues MNKNADSGLSEVVSVALILTVLILVIIMWVLIAFPIMGTNAEQVHNGDVFLEFAQMKADVDTVWLSNSTGITRQAVFTLS PAADRTEVTVFPNLLLAASFGTVTLQYGSMYTRGSETYATVEILYTSSNMYAEEINILYDGGTLSQNDRVILSGSDFGSG SYVVVVNTADVPETVIGGSGVATLNYRLKEIIDPTPGSSDVDHLCVFTMGLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22765; Mature: 22765
Theoretical pI: Translated: 3.94; Mature: 3.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKNADSGLSEVVSVALILTVLILVIIMWVLIAFPIMGTNAEQVHNGDVFLEFAQMKADV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEEEEEEHHCCCC DTVWLSNSTGITRQAVFTLSPAADRTEVTVFPNLLLAASFGTVTLQYGSMYTRGSETYAT EEEEEECCCCCCEEEEEEECCCCCCEEEEECCCEEEEECCCEEEEEECCEEECCCCCEEE VEILYTSSNMYAEEINILYDGGTLSQNDRVILSGSDFGSGSYVVVVNTADVPETVIGGSG EEEEEECCCEEEEEEEEEECCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCHHCCCCC VATLNYRLKEIIDPTPGSSDVDHLCVFTMGLQ EEEEEEEHHHHCCCCCCCCCCCEEEEEEECCC >Mature Secondary Structure MNKNADSGLSEVVSVALILTVLILVIIMWVLIAFPIMGTNAEQVHNGDVFLEFAQMKADV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEEEEEEHHCCCC DTVWLSNSTGITRQAVFTLSPAADRTEVTVFPNLLLAASFGTVTLQYGSMYTRGSETYAT EEEEEECCCCCCEEEEEEECCCCCCEEEEECCCEEEEECCCEEEEEECCEEECCCCCEEE VEILYTSSNMYAEEINILYDGGTLSQNDRVILSGSDFGSGSYVVVVNTADVPETVIGGSG EEEEEECCCEEEEEEEEEECCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCHHCCCCC VATLNYRLKEIIDPTPGSSDVDHLCVFTMGLQ EEEEEEEHHHHCCCCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA