| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124486282
Identifier: 124486282
GI number: 124486282
Start: 1503748
End: 1504296
Strand: Reverse
Name: 124486282
Synonym: Mlab_1466
Alternate gene names: NA
Gene position: 1504296-1503748 (Counterclockwise)
Preceding gene: 124486283
Following gene: 124486275
Centisome position: 83.34
GC content: 41.53
Gene sequence:
>549_bases ATGGGTAACTTCTCATCATTGATGTTCAAATCCGTTATTTCCACGAAAAATCATGATAATATTACAGTTATTCTGGATGT TACACGAGGGATACCTTTATCATCAATTCGATACAAAACTAAATTGCATATTATGAAAGTAAGTACAAAGAAAAATGACG GAGTTTCCCCGGTTATCGGTACGATTCTCCTTGTGGCAATCACCGTTGTGCTTGTCGCAATCATCTCGGCTGTCGTAATG GGCATGACCGGGGACATTGGCTCAAGCTATGTCGTTGGTGTGAAAGTAACCCAAAATGCAACTTCTGATGGTTATGCCTT ACTCACCATTACTGGTGGACAGAATACTGGCGATCTGAAAGCCCTGTATGTTTACAATGGGACATCCTCCACACCGATTA CTGCAACTAATTTGGCTCTGAATGCTACACCAGTTGTAGGTATCCCGTATAACTATTATGTTGGAACTGGTCAGGTTGCC CTTTCAGTTGTAGGTAATTTTGCAGACGGTACTAACCAGACCATCTACACTGCAACTGTGAACTACTAA
Upstream 100 bases:
>100_bases ACCGGCACGATTAACCTCGTGTAATTTCGCGAATGGGTATCATCCATATCTTGGATGACTTCTTTTTTTCAGGGTTAGCG GTCCGGTCATCATAACTATT
Downstream 100 bases:
>100_bases TCTTACTAACGTAGATTATTCAGAAATCCCGCAAGGGGTTTCACACCTTTATTTTTCTCATCTTTTCTTAGCTCTGTTTT TCCGATCTATGGATTTTATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MGNFSSLMFKSVISTKNHDNITVILDVTRGIPLSSIRYKTKLHIMKVSTKKNDGVSPVIGTILLVAITVVLVAIISAVVM GMTGDIGSSYVVGVKVTQNATSDGYALLTITGGQNTGDLKALYVYNGTSSTPITATNLALNATPVVGIPYNYYVGTGQVA LSVVGNFADGTNQTIYTATVNY
Sequences:
>Translated_182_residues MGNFSSLMFKSVISTKNHDNITVILDVTRGIPLSSIRYKTKLHIMKVSTKKNDGVSPVIGTILLVAITVVLVAIISAVVM GMTGDIGSSYVVGVKVTQNATSDGYALLTITGGQNTGDLKALYVYNGTSSTPITATNLALNATPVVGIPYNYYVGTGQVA LSVVGNFADGTNQTIYTATVNY >Mature_181_residues GNFSSLMFKSVISTKNHDNITVILDVTRGIPLSSIRYKTKLHIMKVSTKKNDGVSPVIGTILLVAITVVLVAIISAVVMG MTGDIGSSYVVGVKVTQNATSDGYALLTITGGQNTGDLKALYVYNGTSSTPITATNLALNATPVVGIPYNYYVGTGQVAL SVVGNFADGTNQTIYTATVNY
Specific function: Unknown
COG id: COG3430
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19060; Mature: 18929
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNFSSLMFKSVISTKNHDNITVILDVTRGIPLSSIRYKTKLHIMKVSTKKNDGVSPVIG CCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEEEEECCCCCCCCHHHH TILLVAITVVLVAIISAVVMGMTGDIGSSYVVGVKVTQNATSDGYALLTITGGQNTGDLK HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCEE ALYVYNGTSSTPITATNLALNATPVVGIPYNYYVGTGQVALSVVGNFADGTNQTIYTATV EEEEEECCCCCCEEEEEEEEECCCEEECCCEEEECCCEEEEEEEECCCCCCCCEEEEEEE NY CC >Mature Secondary Structure GNFSSLMFKSVISTKNHDNITVILDVTRGIPLSSIRYKTKLHIMKVSTKKNDGVSPVIG CCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEEEEECCCCCCCCHHHH TILLVAITVVLVAIISAVVMGMTGDIGSSYVVGVKVTQNATSDGYALLTITGGQNTGDLK HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCEE ALYVYNGTSSTPITATNLALNATPVVGIPYNYYVGTGQVALSVVGNFADGTNQTIYTATV EEEEEECCCCCCEEEEEEEEECCCEEECCCEEEECCCEEEEEEEECCCCCCCCEEEEEEE NY CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA