| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124486179
Identifier: 124486179
GI number: 124486179
Start: 1382474
End: 1382785
Strand: Reverse
Name: 124486179
Synonym: Mlab_1361
Alternate gene names: NA
Gene position: 1382785-1382474 (Counterclockwise)
Preceding gene: 124486185
Following gene: 124486169
Centisome position: 76.61
GC content: 46.79
Gene sequence:
>312_bases TTGCGGAGGTTTAACATGAGTTACAGATTTTGGGGTTGGGAGCTAAATATGGCAAATCCGGAAGATATGATCAAGCAGTG CATTATGATGCTGCATGCAATGAGTGAAGATTCAACGATTCCGCGGAATATCCGCCGCGTGGCCGATGAAACGATGAAGG TTCTCCAGGATGAGAAGAAAACGATCGGTCTAAGAGCCGCAAGTGCCTTGTCCATGATTGATGAGGTCAGCAATGACTCG AATATGCCGATCCATGCACGGACCAGGATATGGGAACTTGCTTCGACTCTTGAAGCAATACCCTTTGACTAA
Upstream 100 bases:
>100_bases CATTATATCCTCGGGTTTTTTCGTCATGGCTGTTTTTCTCTTCTGTACAAATTGGTTTTCAGAGTATATAATGTCTCAAG AATAAAGGGAGTCTTTATTT
Downstream 100 bases:
>100_bases CTCTTTTTTTCTAACGATCCGCCGATCTTATTCGCAGACGTGAAGCCCGAGTTTTTCGCTGTCTGCATGCGTCTGAGAAG TTCGCCTGCTTCATCTGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MRRFNMSYRFWGWELNMANPEDMIKQCIMMLHAMSEDSTIPRNIRRVADETMKVLQDEKKTIGLRAASALSMIDEVSNDS NMPIHARTRIWELASTLEAIPFD
Sequences:
>Translated_103_residues MRRFNMSYRFWGWELNMANPEDMIKQCIMMLHAMSEDSTIPRNIRRVADETMKVLQDEKKTIGLRAASALSMIDEVSNDS NMPIHARTRIWELASTLEAIPFD >Mature_103_residues MRRFNMSYRFWGWELNMANPEDMIKQCIMMLHAMSEDSTIPRNIRRVADETMKVLQDEKKTIGLRAASALSMIDEVSNDS NMPIHARTRIWELASTLEAIPFD
Specific function: Unknown
COG id: COG1698
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0147 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1361_METLZ (A2ST72)
Other databases:
- EMBL: CP000559 - RefSeq: YP_001030795.1 - ProteinModelPortal: A2ST72 - SMR: A2ST72 - STRING: A2ST72 - GeneID: 4796069 - GenomeReviews: CP000559_GR - KEGG: mla:Mlab_1361 - eggNOG: arNOG12624 - HOGENOM: HBG321640 - OMA: HTRTLIW - ProtClustDB: PRK04330 - BioCyc: MLAB410358:MLAB_1361-MONOMER - HAMAP: MF_00342 - InterPro: IPR023130 - InterPro: IPR005354 - ProDom: PD029943
Pfam domain/function: PF03685 UPF0147
EC number: NA
Molecular weight: Translated: 12021; Mature: 12021
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 9.7 %Met (Translated Protein) 10.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 9.7 %Met (Mature Protein) 10.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRFNMSYRFWGWELNMANPEDMIKQCIMMLHAMSEDSTIPRNIRRVADETMKVLQDEKK CCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH TIGLRAASALSMIDEVSNDSNMPIHARTRIWELASTLEAIPFD HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRRFNMSYRFWGWELNMANPEDMIKQCIMMLHAMSEDSTIPRNIRRVADETMKVLQDEKK CCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH TIGLRAASALSMIDEVSNDSNMPIHARTRIWELASTLEAIPFD HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA