Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124486185

Identifier: 124486185

GI number: 124486185

Start: 1386979

End: 1388220

Strand: Reverse

Name: 124486185

Synonym: Mlab_1367

Alternate gene names: NA

Gene position: 1388220-1386979 (Counterclockwise)

Preceding gene: 124486199

Following gene: 124486179

Centisome position: 76.91

GC content: 52.25

Gene sequence:

>1242_bases
ATGCAGGGACAACGACAAAAGATACTAACAAGGAATGTGAAATATACTCATATGTCCCGACGCATACATACGGGTCTCCT
CCTCCTTCTTGCAGCAGTGCTTTTCTGCGGTGCAGGTCAGGCGGTGGTCACCGAAACTCTGAATGAGACCTATCATCTCG
GAGATTACTACACGGATATCCTGTCCGTTTCAGCAGCGAATGATGGTGGATATTATCTCGGTATTATCCACGATGATATT
TTGTCTCTGGTAAAATCCGATGCGAAAGGAAATGCAATCTGGTCAACCAACGTCACCGGCTCCGAGTTCCGTTTAATCAC
GACCTTGTCGGACGGCGGCTGCGTGTACGTGACCTCGCTCGATACCGACACCTATCTCTGCCGTGCGGATCAGACCGGAA
AGATCATCTATGAAATTCCACTGACCGGCGTTGGCGCAGGGGTTCAGCCGGTTGTGATCAATGGCAATACGATCAAATTT
GCCGGCTGGTTCTGGGAAACCGACACTGGCTTTACCCAGAGTTTTTTGTTGAGTGACGGTACTCCCGCAAACGATCAGCT
CTCCCTTCCGGAAGGCAGGATCCCCGTTTCAATGATGAAGAGTGGCGGGGATTATGTTCTGGTTGGCGGGGCAACGTCCA
ATGTATCTGCCGTCAGCGATGAAGCCTGGATCATGAAAATTAAAGACGGAGGAACGGTCGTCTGGAATACAGTCATAAAA
ACCACCAGTACAGAGCCTGAGTATTACGGCCCCGGAAGCACTGCGTATGCCCTTTGCGAGGGAGAAGACGGAGGGTACTT
CGTTACCGGTACTACGGCTCCGTATAATCTCTCCACCGCTTTTGGCATTATCTGGGCCTCAATGATCTCATCCGACGGAA
CGGTTACGTGGGAAAAGGAGTTCCGTGGAGCTGTTCCCTACGGCGTTGCGAAACTCGGTGACGATTACCTGATCGCTGGT
ACCGGCTGGAACGCTCCTCTCTGGATGACCCTTACACCGGCTGGAGCCTTGCTTCAGGTTGTTTATCCTGAAGTGACTGG
TCAGTTCAACTCGGTCGCTCAGGTTTCATCCGGCAGCGTTGTTATGTCCGGGTGGAGTTATCTCACCGGATCGCCCGACG
GATATTTGGTCGAGATCACTGATGATTCGGTGCCAGCTGAAAGCCCGGTTCCGATCGCAGGAATCATTCTTGGTCTCTCA
GTTGCTGGAATCGCTGCTTTCATCGGCTCGCGCCGTCGGTAA

Upstream 100 bases:

>100_bases
GGAGAGAGCTTCGGATGAGGCGATTACCTGGGTTCCGTCGAATTCTGCTTTCACGCGGAGTTAAGGTTTGTTCTCTATTA
TCATTAATGAAGGGGGTGTA

Downstream 100 bases:

>100_bases
ATCTGCAGAATGATCATTGACAGGGTTGTAAAGCCCCGTTACCAATCTATTTTTCCATAAAGACTCAGTTAAACAGAAAA
GATCCCGTCACAAAAAAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MQGQRQKILTRNVKYTHMSRRIHTGLLLLLAAVLFCGAGQAVVTETLNETYHLGDYYTDILSVSAANDGGYYLGIIHDDI
LSLVKSDAKGNAIWSTNVTGSEFRLITTLSDGGCVYVTSLDTDTYLCRADQTGKIIYEIPLTGVGAGVQPVVINGNTIKF
AGWFWETDTGFTQSFLLSDGTPANDQLSLPEGRIPVSMMKSGGDYVLVGGATSNVSAVSDEAWIMKIKDGGTVVWNTVIK
TTSTEPEYYGPGSTAYALCEGEDGGYFVTGTTAPYNLSTAFGIIWASMISSDGTVTWEKEFRGAVPYGVAKLGDDYLIAG
TGWNAPLWMTLTPAGALLQVVYPEVTGQFNSVAQVSSGSVVMSGWSYLTGSPDGYLVEITDDSVPAESPVPIAGIILGLS
VAGIAAFIGSRRR

Sequences:

>Translated_413_residues
MQGQRQKILTRNVKYTHMSRRIHTGLLLLLAAVLFCGAGQAVVTETLNETYHLGDYYTDILSVSAANDGGYYLGIIHDDI
LSLVKSDAKGNAIWSTNVTGSEFRLITTLSDGGCVYVTSLDTDTYLCRADQTGKIIYEIPLTGVGAGVQPVVINGNTIKF
AGWFWETDTGFTQSFLLSDGTPANDQLSLPEGRIPVSMMKSGGDYVLVGGATSNVSAVSDEAWIMKIKDGGTVVWNTVIK
TTSTEPEYYGPGSTAYALCEGEDGGYFVTGTTAPYNLSTAFGIIWASMISSDGTVTWEKEFRGAVPYGVAKLGDDYLIAG
TGWNAPLWMTLTPAGALLQVVYPEVTGQFNSVAQVSSGSVVMSGWSYLTGSPDGYLVEITDDSVPAESPVPIAGIILGLS
VAGIAAFIGSRRR
>Mature_413_residues
MQGQRQKILTRNVKYTHMSRRIHTGLLLLLAAVLFCGAGQAVVTETLNETYHLGDYYTDILSVSAANDGGYYLGIIHDDI
LSLVKSDAKGNAIWSTNVTGSEFRLITTLSDGGCVYVTSLDTDTYLCRADQTGKIIYEIPLTGVGAGVQPVVINGNTIKF
AGWFWETDTGFTQSFLLSDGTPANDQLSLPEGRIPVSMMKSGGDYVLVGGATSNVSAVSDEAWIMKIKDGGTVVWNTVIK
TTSTEPEYYGPGSTAYALCEGEDGGYFVTGTTAPYNLSTAFGIIWASMISSDGTVTWEKEFRGAVPYGVAKLGDDYLIAG
TGWNAPLWMTLTPAGALLQVVYPEVTGQFNSVAQVSSGSVVMSGWSYLTGSPDGYLVEITDDSVPAESPVPIAGIILGLS
VAGIAAFIGSRRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43906; Mature: 43906

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGQRQKILTRNVKYTHMSRRIHTGLLLLLAAVLFCGAGQAVVTETLNETYHLGDYYTDI
CCCCHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCEEECCCHHEEH
LSVSAANDGGYYLGIIHDDILSLVKSDAKGNAIWSTNVTGSEFRLITTLSDGGCVYVTSL
EEEEECCCCCEEEEEEHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEEECCCCEEEEEEE
DTDTYLCRADQTGKIIYEIPLTGVGAGVQPVVINGNTIKFAGWFWETDTGFTQSFLLSDG
CCCEEEEECCCCCCEEEEECCCCCCCCCEEEEEECCEEEEEEEEEECCCCCCEEEEECCC
TPANDQLSLPEGRIPVSMMKSGGDYVLVGGATSNVSAVSDEAWIMKIKDGGTVVWNTVIK
CCCCCCCCCCCCCCCHHHHHCCCCEEEECCCCCCCCEECCCEEEEEECCCCEEEEEEEEE
TTSTEPEYYGPGSTAYALCEGEDGGYFVTGTTAPYNLSTAFGIIWASMISSDGTVTWEKE
ECCCCCCEECCCCCEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEHHH
FRGAVPYGVAKLGDDYLIAGTGWNAPLWMTLTPAGALLQVVYPEVTGQFNSVAQVSSGSV
CCCCCCCCHHHCCCCEEEEECCCCCEEEEEECCCCCEEEEEEHHHCCCCCCEEEECCCCE
VMSGWSYLTGSPDGYLVEITDDSVPAESPVPIAGIILGLSVAGIAAFIGSRRR
EEECCEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQGQRQKILTRNVKYTHMSRRIHTGLLLLLAAVLFCGAGQAVVTETLNETYHLGDYYTDI
CCCCHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCEEECCCHHEEH
LSVSAANDGGYYLGIIHDDILSLVKSDAKGNAIWSTNVTGSEFRLITTLSDGGCVYVTSL
EEEEECCCCCEEEEEEHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEEECCCCEEEEEEE
DTDTYLCRADQTGKIIYEIPLTGVGAGVQPVVINGNTIKFAGWFWETDTGFTQSFLLSDG
CCCEEEEECCCCCCEEEEECCCCCCCCCEEEEEECCEEEEEEEEEECCCCCCEEEEECCC
TPANDQLSLPEGRIPVSMMKSGGDYVLVGGATSNVSAVSDEAWIMKIKDGGTVVWNTVIK
CCCCCCCCCCCCCCCHHHHHCCCCEEEECCCCCCCCEECCCEEEEEECCCCEEEEEEEEE
TTSTEPEYYGPGSTAYALCEGEDGGYFVTGTTAPYNLSTAFGIIWASMISSDGTVTWEKE
ECCCCCCEECCCCCEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEHHH
FRGAVPYGVAKLGDDYLIAGTGWNAPLWMTLTPAGALLQVVYPEVTGQFNSVAQVSSGSV
CCCCCCCCHHHCCCCEEEEECCCCCEEEEEECCCCCEEEEEEHHHCCCCCCEEEECCCCE
VMSGWSYLTGSPDGYLVEITDDSVPAESPVPIAGIILGLSVAGIAAFIGSRRR
EEECCEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA