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The map label for this gene is rpl15e

Identifier: 124486162

GI number: 124486162

Start: 1367797

End: 1368381

Strand: Reverse

Name: rpl15e

Synonym: Mlab_1344

Alternate gene names: 124486162

Gene position: 1368381-1367797 (Counterclockwise)

Preceding gene: 124486163

Following gene: 124486161

Centisome position: 75.81

GC content: 56.07

Gene sequence:

>585_bases
ATGTCGAAATCAATGTATGGATATGTCCGTGACGCGTGGAAAAAGCCCGCAGAGTCCGGAGTAAAGAAGCTCCTCTGGGA
GAGAATGCAGACCTGGCGCCGTCAGGGTGCCGTTGTTCGGCTTGAGCGCCCGACCCGTATCGACAGAGCACGGGAGCTCG
GATATAAAGCAAAACAGGGCATCATCGTTGTTCGCGCATCCATCCGCCGTGGTGGCCGCAGAAAATCGAGATACATCCGC
GGACGCAGAACCAACCGTATGGGAATGCGCAAAGCAACCCCCGGCAAGAACCTGCAGTCCATCGCAGAAGAGCGCGCCGC
AACCCGCTACCCGAACATGGAAGTTTTAAACTCCTACTGGGTAGGTCAGGACGGAAAGAGCAAGTACTACGAGGTTATCC
TTGTTGACAGAAACAGCCCGTCTGTTCTCGCCGACAAGAACCTTGCATGGGTCGCAGACACCCGTGGACGTGTGTTCCGT
GGAAAGACTTCCGCCGGAAGAAGGGCACGCGGTCTCCACAACCGCGGAACCGGAACTGAAAAGTGCCGGCCAAGCCTTAC
CTCCCACAAGAATCAGGGTAAATAA

Upstream 100 bases:

>100_bases
TAGCTCCAATAATATACAGTTTACAGCTAGCCGCATCAAGGTGCGGTCTGTATATCACAGGAATGTAGCCGATACGGCTG
AACCTGAGGTGAAACAACAC

Downstream 100 bases:

>100_bases
CCCGGTTCTCATTTTTTCTCATTATGATAACAGACGCATGCGTGTATGCGAATGACTCGTCAAACACCACGCTTCGTCGC
TTTGCTCTGACCGCCGCTTC

Product: 50S ribosomal protein L15e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MSKSMYGYVRDAWKKPAESGVKKLLWERMQTWRRQGAVVRLERPTRIDRARELGYKAKQGIIVVRASIRRGGRRKSRYIR
GRRTNRMGMRKATPGKNLQSIAEERAATRYPNMEVLNSYWVGQDGKSKYYEVILVDRNSPSVLADKNLAWVADTRGRVFR
GKTSAGRRARGLHNRGTGTEKCRPSLTSHKNQGK

Sequences:

>Translated_194_residues
MSKSMYGYVRDAWKKPAESGVKKLLWERMQTWRRQGAVVRLERPTRIDRARELGYKAKQGIIVVRASIRRGGRRKSRYIR
GRRTNRMGMRKATPGKNLQSIAEERAATRYPNMEVLNSYWVGQDGKSKYYEVILVDRNSPSVLADKNLAWVADTRGRVFR
GKTSAGRRARGLHNRGTGTEKCRPSLTSHKNQGK
>Mature_193_residues
SKSMYGYVRDAWKKPAESGVKKLLWERMQTWRRQGAVVRLERPTRIDRARELGYKAKQGIIVVRASIRRGGRRKSRYIRG
RRTNRMGMRKATPGKNLQSIAEERAATRYPNMEVLNSYWVGQDGKSKYYEVILVDRNSPSVLADKNLAWVADTRGRVFRG
KTSAGRRARGLHNRGTGTEKCRPSLTSHKNQGK

Specific function: Unknown

COG id: COG1632

COG function: function code J; Ribosomal protein L15E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L15e family

Homologues:

Organism=Homo sapiens, GI15431293, Length=172, Percent_Identity=39.5348837209302, Blast_Score=117, Evalue=5e-27,
Organism=Caenorhabditis elegans, GI17541432, Length=174, Percent_Identity=38.5057471264368, Blast_Score=94, Evalue=3e-20,
Organism=Saccharomyces cerevisiae, GI6323057, Length=178, Percent_Identity=38.2022471910112, Blast_Score=109, Evalue=3e-25,
Organism=Saccharomyces cerevisiae, GI6323769, Length=178, Percent_Identity=37.6404494382022, Blast_Score=107, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL15E_METLZ (A2ST55)

Other databases:

- EMBL:   CP000559
- RefSeq:   YP_001030778.1
- ProteinModelPortal:   A2ST55
- SMR:   A2ST55
- STRING:   A2ST55
- GeneID:   4795533
- GenomeReviews:   CP000559_GR
- KEGG:   mla:Mlab_1344
- eggNOG:   arNOG05300
- HOGENOM:   HBG577798
- OMA:   KWYEVIL
- PhylomeDB:   A2ST55
- ProtClustDB:   PRK04243
- BioCyc:   MLAB410358:MLAB_1344-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00256
- InterPro:   IPR000439
- InterPro:   IPR020926
- InterPro:   IPR020925
- InterPro:   IPR012678
- Gene3D:   G3DSA:3.40.1120.10
- PANTHER:   PTHR11847

Pfam domain/function: PF00827 Ribosomal_L15e; SSF54189 L23_L15e_core

EC number: NA

Molecular weight: Translated: 22323; Mature: 22192

Theoretical pI: Translated: 11.98; Mature: 11.98

Prosite motif: PS01194 RIBOSOMAL_L15E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKSMYGYVRDAWKKPAESGVKKLLWERMQTWRRQGAVVRLERPTRIDRARELGYKAKQG
CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCHHHCC
IIVVRASIRRGGRRKSRYIRGRRTNRMGMRKATPGKNLQSIAEERAATRYPNMEVLNSYW
EEEEEECHHCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHC
VGQDGKSKYYEVILVDRNSPSVLADKNLAWVADTRGRVFRGKTSAGRRARGLHNRGTGTE
CCCCCCCCEEEEEEEECCCCCEEECCCEEEEECCCCCEEECCCCCCHHHCCCCCCCCCCH
KCRPSLTSHKNQGK
HHCCCHHCCCCCCC
>Mature Secondary Structure 
SKSMYGYVRDAWKKPAESGVKKLLWERMQTWRRQGAVVRLERPTRIDRARELGYKAKQG
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHCCHHHCC
IIVVRASIRRGGRRKSRYIRGRRTNRMGMRKATPGKNLQSIAEERAATRYPNMEVLNSYW
EEEEEECHHCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHC
VGQDGKSKYYEVILVDRNSPSVLADKNLAWVADTRGRVFRGKTSAGRRARGLHNRGTGTE
CCCCCCCCEEEEEEEECCCCCEEECCCEEEEECCCCCEEECCCCCCHHHCCCCCCCCCCH
KCRPSLTSHKNQGK
HHCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA