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The map label for this gene is rnp2

Identifier: 124486160

GI number: 124486160

Start: 1366689

End: 1367132

Strand: Reverse

Name: rnp2

Synonym: Mlab_1342

Alternate gene names: 124486160

Gene position: 1367132-1366689 (Counterclockwise)

Preceding gene: 124486161

Following gene: 124486159

Centisome position: 75.74

GC content: 53.38

Gene sequence:

>444_bases
ATGAGCGTTCTTCCGCCGACCCTTCGCGAAAACCGGCGCTACGTCCTGTTTCGCATCATCACCCTGGTGAACCCGACCCA
AAAAGAGGTGTACCGGTCCATGGCGGATTCGGTCTCCGCACTTTTCGGTGACGCCGGGGCGGCAAAAATGCACCCGGCCG
TCGTCTGGTCGGAGGGCGAGTATGCGATCGCCAGATGTACCCGCGGATACGAACAGTCCCTCATCGCCGCTTTGGCCGTT
GTCACCAAAGTCTGCGGAGAACCTGCGTCATTTCGGTCGCTCGCTACATCCGGCACGATCCTTTCTTTAAAAAAGAAGGT
GATCCCCGAAAGCATCGACGACACCACATATCCGGGGTATTTGTGCGCAGGTAAGAAGGTTAATAATCTCTCAAAAGAGA
ATGGGCATAGATATCTAACTAGAGATGATATAATTAAGGAGTAA

Upstream 100 bases:

>100_bases
CCCTCTTCGGCATGACGAAGGAAGAGACGAACGCCGCTCTTTCCTCCCTTGACGGAATCCTCTATCCGAAAAAGACGGTC
GAGATCGTGGAGGAGAAATC

Downstream 100 bases:

>100_bases
CAATGCAGCCACAACAATATCAAATGGGCGGGTACGATCGTGCCATCACGATGTTCTCCCCCGACGGACGTCTGTATCAG
GTTGAATATGCACGTGAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: RNase P component 2

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MSVLPPTLRENRRYVLFRIITLVNPTQKEVYRSMADSVSALFGDAGAAKMHPAVVWSEGEYAIARCTRGYEQSLIAALAV
VTKVCGEPASFRSLATSGTILSLKKKVIPESIDDTTYPGYLCAGKKVNNLSKENGHRYLTRDDIIKE

Sequences:

>Translated_147_residues
MSVLPPTLRENRRYVLFRIITLVNPTQKEVYRSMADSVSALFGDAGAAKMHPAVVWSEGEYAIARCTRGYEQSLIAALAV
VTKVCGEPASFRSLATSGTILSLKKKVIPESIDDTTYPGYLCAGKKVNNLSKENGHRYLTRDDIIKE
>Mature_146_residues
SVLPPTLRENRRYVLFRIITLVNPTQKEVYRSMADSVSALFGDAGAAKMHPAVVWSEGEYAIARCTRGYEQSLIAALAVV
TKVCGEPASFRSLATSGTILSLKKKVIPESIDDTTYPGYLCAGKKVNNLSKENGHRYLTRDDIIKE

Specific function: Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends

COG id: COG1369

COG function: function code J; RNase P/RNase MRP subunit POP5

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the eukaryotic/archaeal RNase P protein component 2 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RNP2_METLZ (A2ST53)

Other databases:

- EMBL:   CP000559
- RefSeq:   YP_001030776.1
- ProteinModelPortal:   A2ST53
- SMR:   A2ST53
- STRING:   A2ST53
- GeneID:   4795369
- GenomeReviews:   CP000559_GR
- KEGG:   mla:Mlab_1342
- eggNOG:   arNOG11703
- HOGENOM:   HBG541652
- OMA:   RYILARI
- BioCyc:   MLAB410358:MLAB_1342-MONOMER
- HAMAP:   MF_00755
- InterPro:   IPR002759

Pfam domain/function: PF01900 RNase_P_Rpp14

EC number: =3.1.26.5

Molecular weight: Translated: 16212; Mature: 16081

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLPPTLRENRRYVLFRIITLVNPTQKEVYRSMADSVSALFGDAGAAKMHPAVVWSEGE
CCCCCCCHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCC
YAIARCTRGYEQSLIAALAVVTKVCGEPASFRSLATSGTILSLKKKVIPESIDDTTYPGY
CHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCE
LCAGKKVNNLSKENGHRYLTRDDIIKE
EECCCCCCCCCCCCCCCCCCHHHHCCC
>Mature Secondary Structure 
SVLPPTLRENRRYVLFRIITLVNPTQKEVYRSMADSVSALFGDAGAAKMHPAVVWSEGE
CCCCCCHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCC
YAIARCTRGYEQSLIAALAVVTKVCGEPASFRSLATSGTILSLKKKVIPESIDDTTYPGY
CHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCE
LCAGKKVNNLSKENGHRYLTRDDIIKE
EECCCCCCCCCCCCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA