| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124486149
Identifier: 124486149
GI number: 124486149
Start: 1360466
End: 1360741
Strand: Reverse
Name: 124486149
Synonym: Mlab_1331
Alternate gene names: NA
Gene position: 1360741-1360466 (Counterclockwise)
Preceding gene: 124486154
Following gene: 124486148
Centisome position: 75.39
GC content: 55.07
Gene sequence:
>276_bases ATGAGTACCTATCGGGTGATCCGCTGCCCAGGCTGTCATCAGTTTACCTACACCGACTATTACGGCAAGTGGAAGCTCTG CCCGGTCTGCGGGGAAGTGATCTCGGTGAGGAACGTGCCGGTGTATCTGGAGGTGGACGACTTCTCCGAGGCTGAAGTGC TCATAAAAGAGGTTGAACGGTATCTTTCCCATACCGGACGTCTCGACCTGACAAGAGAAGAGGTCGACCTGATCCGGGAG AAGTATGTGGAATGGCTCAACGGTCCGGCCGCATAA
Upstream 100 bases:
>100_bases ACATAGACTCTTCATATTTACCTGCCGGCTAATAAAAGCACGGGTTTGATGCGAGGGGGCAATCTTTTTGACTCTCTGCG CCAATCATCAATTACTATCT
Downstream 100 bases:
>100_bases GGGCCGTGTCTACCAGAGTTTTCCGCAGTGGGGACAGAGGATCGCAAGCCGCCGTCCGCACCGCGGGCAGTAGAGTTTTC CCCGTGAATCCTGAACGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MSTYRVIRCPGCHQFTYTDYYGKWKLCPVCGEVISVRNVPVYLEVDDFSEAEVLIKEVERYLSHTGRLDLTREEVDLIRE KYVEWLNGPAA
Sequences:
>Translated_91_residues MSTYRVIRCPGCHQFTYTDYYGKWKLCPVCGEVISVRNVPVYLEVDDFSEAEVLIKEVERYLSHTGRLDLTREEVDLIRE KYVEWLNGPAA >Mature_90_residues STYRVIRCPGCHQFTYTDYYGKWKLCPVCGEVISVRNVPVYLEVDDFSEAEVLIKEVERYLSHTGRLDLTREEVDLIREK YVEWLNGPAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10663; Mature: 10532
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTYRVIRCPGCHQFTYTDYYGKWKLCPVCGEVISVRNVPVYLEVDDFSEAEVLIKEVER CCCCEEEECCCCCCCEECCCCCCEEECHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHH YLSHTGRLDLTREEVDLIREKYVEWLNGPAA HHHCCCCCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure STYRVIRCPGCHQFTYTDYYGKWKLCPVCGEVISVRNVPVYLEVDDFSEAEVLIKEVER CCCEEEECCCCCCCEECCCCCCEEECHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHH YLSHTGRLDLTREEVDLIREKYVEWLNGPAA HHHCCCCCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA