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The map label for this gene is pfdB [H]

Identifier: 124486154

GI number: 124486154

Start: 1363672

End: 1364049

Strand: Reverse

Name: pfdB [H]

Synonym: Mlab_1336

Alternate gene names: 124486154

Gene position: 1364049-1363672 (Counterclockwise)

Preceding gene: 124486155

Following gene: 124486149

Centisome position: 75.57

GC content: 56.88

Gene sequence:

>378_bases
ATGACAGCACCCCAGCAGGCGGCGGGAATCCCGCCGCAGATCCAGCAGCAGCTTGGAATGTTCCAGCAGATCCAGCAGCA
GCTTCAGCAGGTATCGTCCCAGAAAATGCAGTATGAGATGACGCTCCGTGAAACGAAGCGTGCTCTTGAAGAGATCGAGG
CCGCGGCAGACGATTCCGTGATCTACTCGGCGATTGGATCCATTCTGATCCAGAAACAGAAGGCTGCCGTCAAAGCGGAA
CTCGAAGAGAAGGTCGACTCCCTTGAACTCCGCATCGGTTCTCTCGACAAGCAGGAGAAGGCAATGACCACCAAAGCAGC
GCAGCTCCAGAAGCAGATCCAGGAAGCAATCAGCGGCGGCGTCCCTGCTGCCCAGTAA

Upstream 100 bases:

>100_bases
ACTCCAGGTGGAAGCGGAGGATGCGGCGTCTCTTCGTGCGTCCCTCAATATGTGGCTGCGGTTGGTTAATGTATCCCACG
AAGTATTGGAGTTGTAAAAA

Downstream 100 bases:

>100_bases
CTTTTTTTTACCAAATTTACAAAAAAATTATTTGCCGAGATTGAGGAAGAGATCCTCTTCGGCGGGTATCGTTTCTATTC
TGCAGTTTTCGCATCTGATG

Product: hypothetical protein

Products: NA

Alternate protein names: GimC subunit beta [H]

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MTAPQQAAGIPPQIQQQLGMFQQIQQQLQQVSSQKMQYEMTLRETKRALEEIEAAADDSVIYSAIGSILIQKQKAAVKAE
LEEKVDSLELRIGSLDKQEKAMTTKAAQLQKQIQEAISGGVPAAQ

Sequences:

>Translated_125_residues
MTAPQQAAGIPPQIQQQLGMFQQIQQQLQQVSSQKMQYEMTLRETKRALEEIEAAADDSVIYSAIGSILIQKQKAAVKAE
LEEKVDSLELRIGSLDKQEKAMTTKAAQLQKQIQEAISGGVPAAQ
>Mature_124_residues
TAPQQAAGIPPQIQQQLGMFQQIQQQLQQVSSQKMQYEMTLRETKRALEEIEAAADDSVIYSAIGSILIQKQKAAVKAEL
EEKVDSLELRIGSLDKQEKAMTTKAAQLQKQIQEAISGGVPAAQ

Specific function: Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding [H]

COG id: COG1382

COG function: function code O; Prefoldin, chaperonin cofactor

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prefoldin subunit beta family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012713
- InterPro:   IPR002777
- InterPro:   IPR009053 [H]

Pfam domain/function: PF01920 Prefoldin_2 [H]

EC number: NA

Molecular weight: Translated: 13739; Mature: 13608

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPQQAAGIPPQIQQQLGMFQQIQQQLQQVSSQKMQYEMTLRETKRALEEIEAAADDSV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
IYSAIGSILIQKQKAAVKAELEEKVDSLELRIGSLDKQEKAMTTKAAQLQKQIQEAISGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
VPAAQ
CCCCC
>Mature Secondary Structure 
TAPQQAAGIPPQIQQQLGMFQQIQQQLQQVSSQKMQYEMTLRETKRALEEIEAAADDSV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
IYSAIGSILIQKQKAAVKAELEEKVDSLELRIGSLDKQEKAMTTKAAQLQKQIQEAISGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
VPAAQ
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA