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The map label for this gene is 124486117

Identifier: 124486117

GI number: 124486117

Start: 1324665

End: 1325423

Strand: Reverse

Name: 124486117

Synonym: Mlab_1297

Alternate gene names: NA

Gene position: 1325423-1324665 (Counterclockwise)

Preceding gene: 298205347

Following gene: 124486116

Centisome position: 73.43

GC content: 54.28

Gene sequence:

>759_bases
ATGGATCAAGTAAACGTCAGATGGTATGTTGAGGATGTCGCCGCTCACTCCTCTCCGATCGTGATTGCCGGACTCCCCGG
TGTCGGACATGTCGGCAAACTCGTGGTCGATCATCTTGTTCATGTTCTCTCGGCCGTAAAAGTTGCCGAGATCACATCTA
CACTCTTTCCTCCGCAGATGTATCTTTCCGAGGATGCGGTACTCCGCATGCCGAGAAACGAGGTGTTTTTTGCGCCAGGG
TCGGAGAATTCCCCCGCGGTCCTTCTCCTAGCGGGCGATTGTCAAAGCACGACGCCCGAGGGTCATTATATTCTTGGGAA
TGCGTATATCCGCATCTTTGAACTTCTGGGAGTAAAACGGATATATACGCTCGGCGGATACGGGGTCGGCCGAATGGTAG
AGACGCCGCGGATTCTTGCCGCACTTTCCTCCTCATCCCTCAAAGAAGAGGTTCTTTTTGCCGGAGCCGTGTTGAACAAA
GACGAACCGGTCGGCGGGATCATCGGTGCCGCCGGTCTTTTGATCACGCTCGGCCGTCTTGTAGGAATGGAGGGCATCGC
TCTCCTTGGTGAGACCTCCGGCTATCTGGTGGATCCCGTCAGTTCGACCGCTGTTCTCGATGTCCTGGAGAAACTTACCG
GCATCAAAGCCGACCGGACCGAACTTGCCGAACTTGCTTCGCAGATGATGACGGAAGTCTCGGCAATTGCCTCAACCATG
CAGAAAAACAATGCCGACGATCTGCGCTATATCGGATAA

Upstream 100 bases:

>100_bases
TTAATACATGTCAGAAATGCGGATGTCCTACGGTGTCTGCCCATCCGGCAAGATATTCTCCTGAGGATCCCTATGGTAAA
TATCGAAGGATGGCAAAAAC

Downstream 100 bases:

>100_bases
TGTCCATGCAGTACAACGCCGATCTCCATTTACACTCCTGTTTTTCGATGGCGACCTCTCCCGAGATGGTCCCAAAACAG
ATACTTGCCGGCTGCCGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MDQVNVRWYVEDVAAHSSPIVIAGLPGVGHVGKLVVDHLVHVLSAVKVAEITSTLFPPQMYLSEDAVLRMPRNEVFFAPG
SENSPAVLLLAGDCQSTTPEGHYILGNAYIRIFELLGVKRIYTLGGYGVGRMVETPRILAALSSSSLKEEVLFAGAVLNK
DEPVGGIIGAAGLLITLGRLVGMEGIALLGETSGYLVDPVSSTAVLDVLEKLTGIKADRTELAELASQMMTEVSAIASTM
QKNNADDLRYIG

Sequences:

>Translated_252_residues
MDQVNVRWYVEDVAAHSSPIVIAGLPGVGHVGKLVVDHLVHVLSAVKVAEITSTLFPPQMYLSEDAVLRMPRNEVFFAPG
SENSPAVLLLAGDCQSTTPEGHYILGNAYIRIFELLGVKRIYTLGGYGVGRMVETPRILAALSSSSLKEEVLFAGAVLNK
DEPVGGIIGAAGLLITLGRLVGMEGIALLGETSGYLVDPVSSTAVLDVLEKLTGIKADRTELAELASQMMTEVSAIASTM
QKNNADDLRYIG
>Mature_252_residues
MDQVNVRWYVEDVAAHSSPIVIAGLPGVGHVGKLVVDHLVHVLSAVKVAEITSTLFPPQMYLSEDAVLRMPRNEVFFAPG
SENSPAVLLLAGDCQSTTPEGHYILGNAYIRIFELLGVKRIYTLGGYGVGRMVETPRILAALSSSSLKEEVLFAGAVLNK
DEPVGGIIGAAGLLITLGRLVGMEGIALLGETSGYLVDPVSSTAVLDVLEKLTGIKADRTELAELASQMMTEVSAIASTM
QKNNADDLRYIG

Specific function: Unknown

COG id: COG2047

COG function: function code R; Uncharacterized protein (ATP-grasp superfamily)

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004426
- InterPro:   IPR019151 [H]

Pfam domain/function: PF09754 HCCA3 [H]

EC number: NA

Molecular weight: Translated: 26748; Mature: 26748

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQVNVRWYVEDVAAHSSPIVIAGLPGVGHVGKLVVDHLVHVLSAVKVAEITSTLFPPQM
CCCCEEEEEEEHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
YLSEDAVLRMPRNEVFFAPGSENSPAVLLLAGDCQSTTPEGHYILGNAYIRIFELLGVKR
HHCCCHHEECCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHH
IYTLGGYGVGRMVETPRILAALSSSSLKEEVLFAGAVLNKDEPVGGIIGAAGLLITLGRL
HHHCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
VGMEGIALLGETSGYLVDPVSSTAVLDVLEKLTGIKADRTELAELASQMMTEVSAIASTM
HCCCCEEEEECCCCEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
QKNNADDLRYIG
HCCCCCCCCCCC
>Mature Secondary Structure
MDQVNVRWYVEDVAAHSSPIVIAGLPGVGHVGKLVVDHLVHVLSAVKVAEITSTLFPPQM
CCCCEEEEEEEHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
YLSEDAVLRMPRNEVFFAPGSENSPAVLLLAGDCQSTTPEGHYILGNAYIRIFELLGVKR
HHCCCHHEECCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHH
IYTLGGYGVGRMVETPRILAALSSSSLKEEVLFAGAVLNKDEPVGGIIGAAGLLITLGRL
HHHCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
VGMEGIALLGETSGYLVDPVSSTAVLDVLEKLTGIKADRTELAELASQMMTEVSAIASTM
HCCCCEEEEECCCCEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
QKNNADDLRYIG
HCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]