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The map label for this gene is 124486116

Identifier: 124486116

GI number: 124486116

Start: 1323544

End: 1324665

Strand: Reverse

Name: 124486116

Synonym: Mlab_1296

Alternate gene names: NA

Gene position: 1324665-1323544 (Counterclockwise)

Preceding gene: 124486117

Following gene: 124486113

Centisome position: 73.39

GC content: 55.61

Gene sequence:

>1122_bases
ATGTCCATGCAGTACAACGCCGATCTCCATTTACACTCCTGTTTTTCGATGGCGACCTCTCCCGAGATGGTCCCAAAACA
GATACTTGCCGGCTGCCGGACCAAGGGGATTCATGTTGTTGGAAGCGGGGATGCACTCCATCCTGTCTGGCGCGGGATGT
GGGAACCGTTTCTCGAAAATGAGTATGGGATCACGGTTGTTCCCCAGACCGAGGTTGAGGACTCTTCCCGTGTCCATCAT
CTGATCTTAATGGAAACCTTCGACCAGTTTGCTGAACTCCAGCAGAGGTTTACACCGGCATGCGGACATCTTACGACTGC
GGGCCGCCCTCATCTCCATCTTTCCGGGGAAGAGATCGCCCGGGAGGTTCATGACCTTGGCGGGATGATTGGGCCGGCGC
ATGCCTTCACGCCGTGGACTTCTCTTTTTGCCGCGTTCGATTTGCCTTCTGAATGTTACGGCGAAGAGAGCATCGAGTTC
TGCGAGCTGGGGCTTTCCGCCGATTCATCCTACGGGGCCGGCATCGAAGAGTTTGCCGGCGTTCCTTTTCTTTCGAATTC
GGATGCCCACAGTGCCGCGCCTGAGAAACTCGGCCGCGAGTTTACGCGCCTGGAGATGTCGGCTTCAACGGTTCCTGCGG
TTCTCGAGGCGATAAAAAAAGGTTCGGTCGTGCTGAATGCCGGTTTTTTCCCGGAAGAAGGAAAATACAACCGAACCGCC
TGCACGCGGTGTTATGCGCAGTTCTCTCTTGCTGAAGCCGAGCGTCTTCACTGGAAGTGCCCTGCTGACAAAGGCCGGAT
AAAAATCGGTGTGAGGGAACGCGCAGAACAGCTTTCCACGATCCCTCCAACGGTCCGTCCGCCCTATCTGAAGATGGTGC
CGCTTGGCGAAGTCATTGCCCGCGTTCTGGGTGTTTCCTCGCCAAACACTAAAAAAGCACGAGCGCTTTATTCTGCATTT
ATCGAGGCATTCGATAATGAGATCGCAATTCTCCTTGAAGTGCCGCGTGATGAACTGGCCCGCATATCGCCAGAGATAGC
CGGAGCCGTTTTATCGATGCGGGAAGGCCGCGTCACGCTGATTCCCGGCGGCGGCGGCCGCTATGGATCTTTTACCCTTT
GA

Upstream 100 bases:

>100_bases
CCGAACTTGCCGAACTTGCTTCGCAGATGATGACGGAAGTCTCGGCAATTGCCTCAACCATGCAGAAAAACAATGCCGAC
GATCTGCGCTATATCGGATA

Downstream 100 bases:

>100_bases
TTATTCACGCGAGAAATGCGCATCGCGATTCATCCATGATCTGCACATCGTCAAGCGACCACAGGCGCATATTCCTTGAG
GTTTTTTCAATACCGAGTTC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 372

Protein sequence:

>373_residues
MSMQYNADLHLHSCFSMATSPEMVPKQILAGCRTKGIHVVGSGDALHPVWRGMWEPFLENEYGITVVPQTEVEDSSRVHH
LILMETFDQFAELQQRFTPACGHLTTAGRPHLHLSGEEIAREVHDLGGMIGPAHAFTPWTSLFAAFDLPSECYGEESIEF
CELGLSADSSYGAGIEEFAGVPFLSNSDAHSAAPEKLGREFTRLEMSASTVPAVLEAIKKGSVVLNAGFFPEEGKYNRTA
CTRCYAQFSLAEAERLHWKCPADKGRIKIGVRERAEQLSTIPPTVRPPYLKMVPLGEVIARVLGVSSPNTKKARALYSAF
IEAFDNEIAILLEVPRDELARISPEIAGAVLSMREGRVTLIPGGGGRYGSFTL

Sequences:

>Translated_373_residues
MSMQYNADLHLHSCFSMATSPEMVPKQILAGCRTKGIHVVGSGDALHPVWRGMWEPFLENEYGITVVPQTEVEDSSRVHH
LILMETFDQFAELQQRFTPACGHLTTAGRPHLHLSGEEIAREVHDLGGMIGPAHAFTPWTSLFAAFDLPSECYGEESIEF
CELGLSADSSYGAGIEEFAGVPFLSNSDAHSAAPEKLGREFTRLEMSASTVPAVLEAIKKGSVVLNAGFFPEEGKYNRTA
CTRCYAQFSLAEAERLHWKCPADKGRIKIGVRERAEQLSTIPPTVRPPYLKMVPLGEVIARVLGVSSPNTKKARALYSAF
IEAFDNEIAILLEVPRDELARISPEIAGAVLSMREGRVTLIPGGGGRYGSFTL
>Mature_372_residues
SMQYNADLHLHSCFSMATSPEMVPKQILAGCRTKGIHVVGSGDALHPVWRGMWEPFLENEYGITVVPQTEVEDSSRVHHL
ILMETFDQFAELQQRFTPACGHLTTAGRPHLHLSGEEIAREVHDLGGMIGPAHAFTPWTSLFAAFDLPSECYGEESIEFC
ELGLSADSSYGAGIEEFAGVPFLSNSDAHSAAPEKLGREFTRLEMSASTVPAVLEAIKKGSVVLNAGFFPEEGKYNRTAC
TRCYAQFSLAEAERLHWKCPADKGRIKIGVRERAEQLSTIPPTVRPPYLKMVPLGEVIARVLGVSSPNTKKARALYSAFI
EAFDNEIAILLEVPRDELARISPEIAGAVLSMREGRVTLIPGGGGRYGSFTL

Specific function: Unknown

COG id: COG1379

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DOD-type homing endonuclease domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005287
- InterPro:   IPR003586
- InterPro:   IPR003587
- InterPro:   IPR006142
- InterPro:   IPR004042
- InterPro:   IPR006141
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40807; Mature: 40676

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMQYNADLHLHSCFSMATSPEMVPKQILAGCRTKGIHVVGSGDALHPVWRGMWEPFLEN
CCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCC
EYGITVVPQTEVEDSSRVHHLILMETFDQFAELQQRFTPACGHLTTAGRPHLHLSGEEIA
CCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECHHHHH
REVHDLGGMIGPAHAFTPWTSLFAAFDLPSECYGEESIEFCELGLSADSSYGAGIEEFAG
HHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHCCCCCCCCCCCHHHHCC
VPFLSNSDAHSAAPEKLGREFTRLEMSASTVPAVLEAIKKGSVVLNAGFFPEEGKYNRTA
CCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHH
CTRCYAQFSLAEAERLHWKCPADKGRIKIGVRERAEQLSTIPPTVRPPYLKMVPLGEVIA
HHHHHHHHHHHHHHHCEEECCCCCCEEEECHHHHHHHHHCCCCCCCCCCEEECCHHHHHH
RVLGVSSPNTKKARALYSAFIEAFDNEIAILLEVPRDELARISPEIAGAVLSMREGRVTL
HHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCHHHHHHHHHHCCCEEEE
IPGGGGRYGSFTL
EECCCCCCCCCCC
>Mature Secondary Structure 
SMQYNADLHLHSCFSMATSPEMVPKQILAGCRTKGIHVVGSGDALHPVWRGMWEPFLEN
CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCC
EYGITVVPQTEVEDSSRVHHLILMETFDQFAELQQRFTPACGHLTTAGRPHLHLSGEEIA
CCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECHHHHH
REVHDLGGMIGPAHAFTPWTSLFAAFDLPSECYGEESIEFCELGLSADSSYGAGIEEFAG
HHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHCCCCCCCCCCCHHHHCC
VPFLSNSDAHSAAPEKLGREFTRLEMSASTVPAVLEAIKKGSVVLNAGFFPEEGKYNRTA
CCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHH
CTRCYAQFSLAEAERLHWKCPADKGRIKIGVRERAEQLSTIPPTVRPPYLKMVPLGEVIA
HHHHHHHHHHHHHHHCEEECCCCCCEEEECHHHHHHHHHCCCCCCCCCCEEECCHHHHHH
RVLGVSSPNTKKARALYSAFIEAFDNEIAILLEVPRDELARISPEIAGAVLSMREGRVTL
HHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCHHHHHHHHHHCCCEEEE
IPGGGGRYGSFTL
EECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]