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The map label for this gene is rps2P

Identifier: 124486057

GI number: 124486057

Start: 1267922

End: 1268530

Strand: Reverse

Name: rps2P

Synonym: Mlab_1237

Alternate gene names: 124486057

Gene position: 1268530-1267922 (Counterclockwise)

Preceding gene: 124486058

Following gene: 124486056

Centisome position: 70.28

GC content: 49.75

Gene sequence:

>609_bases
ATGACCGACAATGAACTTGGAATTGAATTAAACGAACCATTAGTATCTGTAGAAGAATATCTTGCCGCCGGTGTCCATAT
CGGAACCCAGCAGAAAGACAACGACATGAAAGACTTCATCTACCGTGTCAGATCCGACGGTCTCTATATCATCGATATCA
GAAAGACCGACGAGCGGATCAAACAGGTAGCAAAGTTCCTTGCACGCTACGAGCCTGCAAAGATCTTCGTCGTCACCTCC
CGTCAGTATGGTCAGTACCCGGCACAGAAGTTCGCAGACACGATCGGCGCTCTCTCCCACGTTGGAAGATTCATCCCGGG
AACCTTAACCAACCCGAAACTCCCGAAGTATGTTGAACCCTCGGTCGTTATCGTCACCGACCCGATCGGAGATGCTCAGG
TCATCACCGAGGCCGTCCAGTGCGGTATGCCGGTAATTGCCCTTTGTGATATCAACAACCGTACAAACAATGTTGATCTC
GTCATCCCGACCAACAACAAGGGACGCAAAGCACTCTCTATGGTTTACTTCCTGTTAACCAAAGAGTTCCTCAGACAGAA
AGGCATCGTCTCGGCCATGACGGTCGAAGACTTCGAGTCTGAGTTCTAA

Upstream 100 bases:

>100_bases
GCAACGGCATTCGGCTGCTGCTTTATGAAGAGCGGTGTTGTTGGTGGAGAGCGCATTGCTAAACTAAATGAACTTATAAG
AATTGAGGAGCATTTCTAAA

Downstream 100 bases:

>100_bases
AGCTGACGATCCGCCTCAGGCGATTCCTCAGCACAATAAAATAGAAAATCCCCCCTTTTTTAGTGAACCAACGGTTCAAC
GGTCTTTGATTATTTGTGAA

Product: 30S ribosomal protein S2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MTDNELGIELNEPLVSVEEYLAAGVHIGTQQKDNDMKDFIYRVRSDGLYIIDIRKTDERIKQVAKFLARYEPAKIFVVTS
RQYGQYPAQKFADTIGALSHVGRFIPGTLTNPKLPKYVEPSVVIVTDPIGDAQVITEAVQCGMPVIALCDINNRTNNVDL
VIPTNNKGRKALSMVYFLLTKEFLRQKGIVSAMTVEDFESEF

Sequences:

>Translated_202_residues
MTDNELGIELNEPLVSVEEYLAAGVHIGTQQKDNDMKDFIYRVRSDGLYIIDIRKTDERIKQVAKFLARYEPAKIFVVTS
RQYGQYPAQKFADTIGALSHVGRFIPGTLTNPKLPKYVEPSVVIVTDPIGDAQVITEAVQCGMPVIALCDINNRTNNVDL
VIPTNNKGRKALSMVYFLLTKEFLRQKGIVSAMTVEDFESEF
>Mature_201_residues
TDNELGIELNEPLVSVEEYLAAGVHIGTQQKDNDMKDFIYRVRSDGLYIIDIRKTDERIKQVAKFLARYEPAKIFVVTSR
QYGQYPAQKFADTIGALSHVGRFIPGTLTNPKLPKYVEPSVVIVTDPIGDAQVITEAVQCGMPVIALCDINNRTNNVDLV
IPTNNKGRKALSMVYFLLTKEFLRQKGIVSAMTVEDFESEF

Specific function: Unknown

COG id: COG0052

COG function: function code J; Ribosomal protein S2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S2P family

Homologues:

Organism=Homo sapiens, GI9845502, Length=176, Percent_Identity=40.3409090909091, Blast_Score=148, Evalue=3e-36,
Organism=Homo sapiens, GI59859885, Length=176, Percent_Identity=40.3409090909091, Blast_Score=148, Evalue=3e-36,
Organism=Caenorhabditis elegans, GI17554768, Length=179, Percent_Identity=35.195530726257, Blast_Score=119, Evalue=1e-27,
Organism=Saccharomyces cerevisiae, GI6323077, Length=169, Percent_Identity=38.4615384615385, Blast_Score=132, Evalue=3e-32,
Organism=Saccharomyces cerevisiae, GI6321653, Length=169, Percent_Identity=37.8698224852071, Blast_Score=132, Evalue=3e-32,
Organism=Drosophila melanogaster, GI24639112, Length=176, Percent_Identity=35.2272727272727, Blast_Score=125, Evalue=2e-29,
Organism=Drosophila melanogaster, GI17136518, Length=176, Percent_Identity=35.2272727272727, Blast_Score=125, Evalue=2e-29,
Organism=Drosophila melanogaster, GI45551198, Length=176, Percent_Identity=35.2272727272727, Blast_Score=125, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS2_METLZ (A2SSV0)

Other databases:

- EMBL:   CP000559
- RefSeq:   YP_001030673.1
- ProteinModelPortal:   A2SSV0
- SMR:   A2SSV0
- STRING:   A2SSV0
- GeneID:   4794940
- GenomeReviews:   CP000559_GR
- KEGG:   mla:Mlab_1237
- eggNOG:   arNOG08216
- HOGENOM:   HBG736296
- OMA:   KKFIYRV
- PhylomeDB:   A2SSV0
- ProtClustDB:   PRK04020
- BioCyc:   MLAB410358:MLAB_1237-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00291_A
- InterPro:   IPR001865
- InterPro:   IPR018130
- InterPro:   IPR005707
- PANTHER:   PTHR11489
- PRINTS:   PR00395
- TIGRFAMs:   TIGR01012

Pfam domain/function: PF00318 Ribosomal_S2; SSF52313 Ribosomal_S2

EC number: NA

Molecular weight: Translated: 22676; Mature: 22545

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: PS00962 RIBOSOMAL_S2_1; PS00963 RIBOSOMAL_S2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDNELGIELNEPLVSVEEYLAAGVHIGTQQKDNDMKDFIYRVRSDGLYIIDIRKTDERI
CCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCHHHH
KQVAKFLARYEPAKIFVVTSRQYGQYPAQKFADTIGALSHVGRFIPGTLTNPKLPKYVEP
HHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
SVVIVTDPIGDAQVITEAVQCGMPVIALCDINNRTNNVDLVIPTNNKGRKALSMVYFLLT
CEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHH
KEFLRQKGIVSAMTVEDFESEF
HHHHHHCCCEEEEEHHHHHCCC
>Mature Secondary Structure 
TDNELGIELNEPLVSVEEYLAAGVHIGTQQKDNDMKDFIYRVRSDGLYIIDIRKTDERI
CCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCHHHH
KQVAKFLARYEPAKIFVVTSRQYGQYPAQKFADTIGALSHVGRFIPGTLTNPKLPKYVEP
HHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
SVVIVTDPIGDAQVITEAVQCGMPVIALCDINNRTNNVDLVIPTNNKGRKALSMVYFLLT
CEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHH
KEFLRQKGIVSAMTVEDFESEF
HHHHHHCCCEEEEEHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA