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The map label for this gene is rps17e

Identifier: 124486046

GI number: 124486046

Start: 1256423

End: 1256617

Strand: Reverse

Name: rps17e

Synonym: Mlab_1226

Alternate gene names: 124486046

Gene position: 1256617-1256423 (Counterclockwise)

Preceding gene: 124486047

Following gene: 124486035

Centisome position: 69.62

GC content: 48.21

Gene sequence:

>195_bases
ATGGGAATCAAGCCAAGTTATATCAAATCAATGGGCATCGCCCTTCTCGAACAGCACGGAAAAAGCTTCAACGGCAACTT
TGACGACAACAAGAAAGTTGTTGCTGAAATCACCACGATCGAAAGCAAAATGATCCGTAACCGTGTCGCAGGATACGTTA
CCCGCAAGGTCAACACCACTCCCGCACGCCGGTAA

Upstream 100 bases:

>100_bases
GGGCAGGATATGCCTCCTTGGAACCACTCCTGAGGAGGTAGCAAACAGAATACTTATCATATCTCAACGTCTTACATATA
TAGACATCTGAGGAATACTC

Downstream 100 bases:

>100_bases
CTTCCCGGCTCAATATCTTTTTCCAACGTCTTTTCGTTTTTTTCTCTACTTACCAGTATAGACCTGTTTTTTTGCACAAT
CTGCATCATAATGAAAAAAG

Product: SSU ribosomal protein S17E

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 64; Mature: 63

Protein sequence:

>64_residues
MGIKPSYIKSMGIALLEQHGKSFNGNFDDNKKVVAEITTIESKMIRNRVAGYVTRKVNTTPARR

Sequences:

>Translated_64_residues
MGIKPSYIKSMGIALLEQHGKSFNGNFDDNKKVVAEITTIESKMIRNRVAGYVTRKVNTTPARR
>Mature_63_residues
GIKPSYIKSMGIALLEQHGKSFNGNFDDNKKVVAEITTIESKMIRNRVAGYVTRKVNTTPARR

Specific function: Unknown

COG id: COG1383

COG function: function code J; Ribosomal protein S17E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S17e family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS17E_METLZ (A2SST9)

Other databases:

- EMBL:   CP000559
- RefSeq:   YP_001030662.1
- ProteinModelPortal:   A2SST9
- SMR:   A2SST9
- STRING:   A2SST9
- GeneID:   4795834
- GenomeReviews:   CP000559_GR
- KEGG:   mla:Mlab_1226
- eggNOG:   arNOG14336
- HOGENOM:   HBG460442
- OMA:   HTRERPL
- BioCyc:   MLAB410358:MLAB_1226-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00511
- InterPro:   IPR001210
- InterPro:   IPR018273
- Gene3D:   G3DSA:1.10.60.20
- PANTHER:   PTHR10732

Pfam domain/function: PF00833 Ribosomal_S17e

EC number: NA

Molecular weight: Translated: 7182; Mature: 7051

Theoretical pI: Translated: 10.95; Mature: 10.95

Prosite motif: PS00712 RIBOSOMAL_S17E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIKPSYIKSMGIALLEQHGKSFNGNFDDNKKVVAEITTIESKMIRNRVAGYVTRKVNTT
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PARR
CCCC
>Mature Secondary Structure 
GIKPSYIKSMGIALLEQHGKSFNGNFDDNKKVVAEITTIESKMIRNRVAGYVTRKVNTT
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PARR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA