Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124486047

Identifier: 124486047

GI number: 124486047

Start: 1256627

End: 1257139

Strand: Reverse

Name: 124486047

Synonym: Mlab_1227

Alternate gene names: NA

Gene position: 1257139-1256627 (Counterclockwise)

Preceding gene: 124486048

Following gene: 124486046

Centisome position: 69.65

GC content: 56.14

Gene sequence:

>513_bases
ATGGGTGCCGGAGCACAGTCGGCGGTTCTCCGCGATCTGCAGAAGGCTCACGGCAAACTGCAGGATGTCTCGCGCTATAT
CATTCCGCGTGACGATCTGGCGATCGCCTATGCGACCGCCGACGCCGTCGACAAGAAAGGCGTCGCCATCGCCAGAGGTT
CGAGCGTAGGGTTCGGCGTCGATGAACCGATCGTCAAGACCCTTCTTACCGTCCGGCGTTTCGATCCCACCATTCGCTCG
GCGGCATGCATACGCTATGAGGACGATATCCTCGCAACTGCTGTCGAAACTCTTCGGGATGTCGAGGTTTATGACCCGGA
AAAGTTTCCGGCCGGTATCTCGACCATGGACTGGGGGATCGCTTCGGTATGCAGAAAAGGCGTGCCGCTTGCCATAGCAA
ATCCCGAATCTTCCCGCGGACCGGGCAGGATATGCCTCCTTGGAACCACTCCTGAGGAGGTAGCAAACAGAATACTTATC
ATATCTCAACGTCTTACATATATAGACATCTGA

Upstream 100 bases:

>100_bases
CAAGGATCGCTCTTGGCGACGCTCTTATCCCGAGGGAACGAATGTATGAGATCGCTATCTCCGAGATCACTGCGGTAAAA
GACGAACTGGGGCTGAACTG

Downstream 100 bases:

>100_bases
GGAATACTCATGGGAATCAAGCCAAGTTATATCAAATCAATGGGCATCGCCCTTCTCGAACAGCACGGAAAAAGCTTCAA
CGGCAACTTTGACGACAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MGAGAQSAVLRDLQKAHGKLQDVSRYIIPRDDLAIAYATADAVDKKGVAIARGSSVGFGVDEPIVKTLLTVRRFDPTIRS
AACIRYEDDILATAVETLRDVEVYDPEKFPAGISTMDWGIASVCRKGVPLAIANPESSRGPGRICLLGTTPEEVANRILI
ISQRLTYIDI

Sequences:

>Translated_170_residues
MGAGAQSAVLRDLQKAHGKLQDVSRYIIPRDDLAIAYATADAVDKKGVAIARGSSVGFGVDEPIVKTLLTVRRFDPTIRS
AACIRYEDDILATAVETLRDVEVYDPEKFPAGISTMDWGIASVCRKGVPLAIANPESSRGPGRICLLGTTPEEVANRILI
ISQRLTYIDI
>Mature_169_residues
GAGAQSAVLRDLQKAHGKLQDVSRYIIPRDDLAIAYATADAVDKKGVAIARGSSVGFGVDEPIVKTLLTVRRFDPTIRSA
ACIRYEDDILATAVETLRDVEVYDPEKFPAGISTMDWGIASVCRKGVPLAIANPESSRGPGRICLLGTTPEEVANRILII
SQRLTYIDI

Specific function: Unknown

COG id: COG1992

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18341; Mature: 18210

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAGAQSAVLRDLQKAHGKLQDVSRYIIPRDDLAIAYATADAVDKKGVAIARGSSVGFGV
CCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEEECHHHCCCCEEEECCCCCCCCC
DEPIVKTLLTVRRFDPTIRSAACIRYEDDILATAVETLRDVEVYDPEKFPAGISTMDWGI
CHHHHHHHHHHHHCCCCHHHEEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
ASVCRKGVPLAIANPESSRGPGRICLLGTTPEEVANRILIISQRLTYIDI
HHHHHCCCCEEEECCCCCCCCCEEEEEECCHHHHHCEEEEEECCEEEECC
>Mature Secondary Structure 
GAGAQSAVLRDLQKAHGKLQDVSRYIIPRDDLAIAYATADAVDKKGVAIARGSSVGFGV
CCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEEECHHHCCCCEEEECCCCCCCCC
DEPIVKTLLTVRRFDPTIRSAACIRYEDDILATAVETLRDVEVYDPEKFPAGISTMDWGI
CHHHHHHHHHHHHCCCCHHHEEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
ASVCRKGVPLAIANPESSRGPGRICLLGTTPEEVANRILIISQRLTYIDI
HHHHHCCCCEEEECCCCCCCCCEEEEEECCHHHHHCEEEEEECCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA