The gene/protein map for NC_008942 is currently unavailable.
Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124485934

Identifier: 124485934

GI number: 124485934

Start: 1124752

End: 1125906

Strand: Reverse

Name: 124485934

Synonym: Mlab_1114

Alternate gene names: NA

Gene position: 1125906-1124752 (Counterclockwise)

Preceding gene: 124485935

Following gene: 124485930

Centisome position: 62.38

GC content: 52.47

Gene sequence:

>1155_bases
ATGAACCAGATCACCGGTTCTGCAAAATGCAGTTCATACGATCGGGAAGAGGTCTGTCGGGCAGTGGAGAACGCGATCGA
AGCTGCCGGCGGACTCCCCCCGCTAGCAGGAAAGAAGGTACTTCTCAAACCAAATCTTCTCTCGGATGCCGGATATGAAA
AGGCGGTAAGTACACAGCCTGAAGTACTCTATGCCGTTGGGAAACTGGTTCTGGAAGCAGGCGGCGTTCCATTGATTGCC
GACAGTTCCGGGGCGGGAATATTATATACGCCCCGCGTGATGAAACGCGTCTATCAGAAATGCGGGATCACCCGTATCGC
GGGTGATCTGGGCATCACTTTGTCAAACGAAACGGGATCCCAAGACCGTGCATTTCCCGAAGGAAAGGTGATGAAACATT
TCACGGTCATCGATCAGGCGTGCGAAGCCGATGTCATCATATCGGTCTGTAAATTAAAGACCCACATGTTCACTCAGTAT
TCCGGTGCGGTGAAAAATACGTTTGGAGTCGTGCCTGGACTCGACAAACCGGTGTTTCATTCCAGGTTTCCGGATCCTGC
TGATTTTTCCGAGATGCTGGTGGACTTAAACGAACTGATCCGGCCAGATTTTGTTGTAATGGATGCGGTCGTCGGCATGG
AGGGGAGCGGGCCGATGAGCGGCGATCCAAGACACGTCGGCTATATTCTTGCATCAAAGTCGGTGTATACGCTGGACGTC
ACCGCACAAAGACTCATCTCTATGGATCCTCTGCGGATCCCAACAACAGCGGCTGCCGCCGCCCGCGGTCTCGTGGATCC
GGAAAGCGTCGTAACGGCCGGCGATGCTATTATTCCGCTCACCGATTTTGTGCTGCCTTCGACATACAGTTCTCCTTCAC
GAAATACCTGGTTCCGGCGAAATGTACTGCGCAGGTTCCAGACGATGGGGAAGTATTATGCTCCCGCTCCTGTTGTAAAA
AAGGAGATATGCGTGGGCTGCGGGCAGTGCGTGAGGATATGCCCAGTGGGAGCCGCCGCGATGAAAGGACAAAAAGCGTC
CTTCGACCATAGAAAATGCATACGATGCTACTGCTGTCATGAGATGTGCCAGTATCACGCGATCGAAATGAAAAGAAGTA
TGGCAGGAAGATTCCTGCATATGTTTCTCAGGTGA

Upstream 100 bases:

>100_bases
ATCTCCAGACCGGCAAACGCGTGCCCCTGGAAGAGATCAGCCAGCAATGATCTCATTGAATACCCTTTTTATCACTCCCG
TGTAATAGAATTCATAATTC

Downstream 100 bases:

>100_bases
GCCGACCCGTTCGGCTCACGTTTTTCTGCGGCAGAAGAACGTGCATGTATCGCGGTTACATCTTCCGTCGCAGGGGTCGA
GGTGCACGATCACCGTGACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MNQITGSAKCSSYDREEVCRAVENAIEAAGGLPPLAGKKVLLKPNLLSDAGYEKAVSTQPEVLYAVGKLVLEAGGVPLIA
DSSGAGILYTPRVMKRVYQKCGITRIAGDLGITLSNETGSQDRAFPEGKVMKHFTVIDQACEADVIISVCKLKTHMFTQY
SGAVKNTFGVVPGLDKPVFHSRFPDPADFSEMLVDLNELIRPDFVVMDAVVGMEGSGPMSGDPRHVGYILASKSVYTLDV
TAQRLISMDPLRIPTTAAAAARGLVDPESVVTAGDAIIPLTDFVLPSTYSSPSRNTWFRRNVLRRFQTMGKYYAPAPVVK
KEICVGCGQCVRICPVGAAAMKGQKASFDHRKCIRCYCCHEMCQYHAIEMKRSMAGRFLHMFLR

Sequences:

>Translated_384_residues
MNQITGSAKCSSYDREEVCRAVENAIEAAGGLPPLAGKKVLLKPNLLSDAGYEKAVSTQPEVLYAVGKLVLEAGGVPLIA
DSSGAGILYTPRVMKRVYQKCGITRIAGDLGITLSNETGSQDRAFPEGKVMKHFTVIDQACEADVIISVCKLKTHMFTQY
SGAVKNTFGVVPGLDKPVFHSRFPDPADFSEMLVDLNELIRPDFVVMDAVVGMEGSGPMSGDPRHVGYILASKSVYTLDV
TAQRLISMDPLRIPTTAAAAARGLVDPESVVTAGDAIIPLTDFVLPSTYSSPSRNTWFRRNVLRRFQTMGKYYAPAPVVK
KEICVGCGQCVRICPVGAAAMKGQKASFDHRKCIRCYCCHEMCQYHAIEMKRSMAGRFLHMFLR
>Mature_384_residues
MNQITGSAKCSSYDREEVCRAVENAIEAAGGLPPLAGKKVLLKPNLLSDAGYEKAVSTQPEVLYAVGKLVLEAGGVPLIA
DSSGAGILYTPRVMKRVYQKCGITRIAGDLGITLSNETGSQDRAFPEGKVMKHFTVIDQACEADVIISVCKLKTHMFTQY
SGAVKNTFGVVPGLDKPVFHSRFPDPADFSEMLVDLNELIRPDFVVMDAVVGMEGSGPMSGDPRHVGYILASKSVYTLDV
TAQRLISMDPLRIPTTAAAAARGLVDPESVVTAGDAIIPLTDFVLPSTYSSPSRNTWFRRNVLRRFQTMGKYYAPAPVVK
KEICVGCGQCVRICPVGAAAMKGQKASFDHRKCIRCYCCHEMCQYHAIEMKRSMAGRFLHMFLR

Specific function: Unknown

COG id: COG2006

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007160 [H]

Pfam domain/function: PF04015 DUF362 [H]

EC number: NA

Molecular weight: Translated: 41786; Mature: 41786

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQITGSAKCSSYDREEVCRAVENAIEAAGGLPPLAGKKVLLKPNLLSDAGYEKAVSTQP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCHHHCCCCH
EVLYAVGKLVLEAGGVPLIADSSGAGILYTPRVMKRVYQKCGITRIAGDLGITLSNETGS
HHHHHHHHHHHHCCCCEEEECCCCCCEEECHHHHHHHHHHCCCEEEECCEEEEECCCCCC
QDRAFPEGKVMKHFTVIDQACEADVIISVCKLKTHMFTQYSGAVKNTFGVVPGLDKPVFH
CCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHH
SRFPDPADFSEMLVDLNELIRPDFVVMDAVVGMEGSGPMSGDPRHVGYILASKSVYTLDV
CCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHCCCCCCCCCCCCCEEEEEEECCCEEEEEH
TAQRLISMDPLRIPTTAAAAARGLVDPESVVTAGDAIIPLTDFVLPSTYSSPSRNTWFRR
HHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHCCCCCEEEHHHHHCCCCCCCCCCCHHHHH
NVLRRFQTMGKYYAPAPVVKKEICVGCGQCVRICPVGAAAMKGQKASFDHRKCIRCYCCH
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHH
EMCQYHAIEMKRSMAGRFLHMFLR
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNQITGSAKCSSYDREEVCRAVENAIEAAGGLPPLAGKKVLLKPNLLSDAGYEKAVSTQP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCHHHCCCCH
EVLYAVGKLVLEAGGVPLIADSSGAGILYTPRVMKRVYQKCGITRIAGDLGITLSNETGS
HHHHHHHHHHHHCCCCEEEECCCCCCEEECHHHHHHHHHHCCCEEEECCEEEEECCCCCC
QDRAFPEGKVMKHFTVIDQACEADVIISVCKLKTHMFTQYSGAVKNTFGVVPGLDKPVFH
CCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHH
SRFPDPADFSEMLVDLNELIRPDFVVMDAVVGMEGSGPMSGDPRHVGYILASKSVYTLDV
CCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHCCCCCCCCCCCCCEEEEEEECCCEEEEEH
TAQRLISMDPLRIPTTAAAAARGLVDPESVVTAGDAIIPLTDFVLPSTYSSPSRNTWFRR
HHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHCCCCCEEEHHHHHCCCCCCCCCCCHHHHH
NVLRRFQTMGKYYAPAPVVKKEICVGCGQCVRICPVGAAAMKGQKASFDHRKCIRCYCCH
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHH
EMCQYHAIEMKRSMAGRFLHMFLR
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]