| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485930
Identifier: 124485930
GI number: 124485930
Start: 1120892
End: 1121356
Strand: Reverse
Name: 124485930
Synonym: Mlab_1110
Alternate gene names: NA
Gene position: 1121356-1120892 (Counterclockwise)
Preceding gene: 124485934
Following gene: 124485929
Centisome position: 62.13
GC content: 51.83
Gene sequence:
>465_bases ATGAGTAACGACTTCGAGCGGGAGATGGTCGTCTGCATGAACCGGTTCTTCACCGAAAACAGGATGAAAGGGTTTGCCTA CCGGCTCAAACAGTCTCACTTCAACACGCAGTATGTGGACATCATCGTCGACTCGCTGGATCCTGCCTATTATCTCGCGA TCGAGTGCAAATCCCTGAACGGAAAACGGCTCTACTTTACCAGCAACTTCCATAAAGACAAGGACGGGGTGCATCAGGTC GACAACATCTCCGGGTTCGTCAAATACACCGGCCGCCGCGGCTATCTCGCGGTCGAGTTCCGGGGCCAGGGTGCAAAAAA CGAAGCATATCTTATGCCCTGGACGAAAGTTCTGGAGTTTTTCGAAACATCCCCCGGGATATCTATTGAGGAGTTTAGAA GATGCATTCCGCTCGAACGGGTCTCTGGCGGGTACCGTCTTTCCTGTCTCAATCCATCAGAGTAA
Upstream 100 bases:
>100_bases TATGTGCTTGTACATTTGATCTGACAGACATTAATAATGACGCTTGGCCCGCGTTTTGGTCGCCAGATTCATCACTCTTG AGTACAAAATCATACATCAG
Downstream 100 bases:
>100_bases TTAGGAGTGAAAACCAAATAATATAAAATTCATGACGGCAGCTACAAGATTCATATCAATAAACGGAAGGCCTGTCAAAA CCCCCATCGTGATCGCTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MSNDFEREMVVCMNRFFTENRMKGFAYRLKQSHFNTQYVDIIVDSLDPAYYLAIECKSLNGKRLYFTSNFHKDKDGVHQV DNISGFVKYTGRRGYLAVEFRGQGAKNEAYLMPWTKVLEFFETSPGISIEEFRRCIPLERVSGGYRLSCLNPSE
Sequences:
>Translated_154_residues MSNDFEREMVVCMNRFFTENRMKGFAYRLKQSHFNTQYVDIIVDSLDPAYYLAIECKSLNGKRLYFTSNFHKDKDGVHQV DNISGFVKYTGRRGYLAVEFRGQGAKNEAYLMPWTKVLEFFETSPGISIEEFRRCIPLERVSGGYRLSCLNPSE >Mature_153_residues SNDFEREMVVCMNRFFTENRMKGFAYRLKQSHFNTQYVDIIVDSLDPAYYLAIECKSLNGKRLYFTSNFHKDKDGVHQVD NISGFVKYTGRRGYLAVEFRGQGAKNEAYLMPWTKVLEFFETSPGISIEEFRRCIPLERVSGGYRLSCLNPSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17974; Mature: 17842
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNDFEREMVVCMNRFFTENRMKGFAYRLKQSHFNTQYVDIIVDSLDPAYYLAIECKSLN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEEEECCC GKRLYFTSNFHKDKDGVHQVDNISGFVKYTGRRGYLAVEFRGQGAKNEAYLMPWTKVLEF CCEEEEECCCCCCCCCCHHHCCCCEEEEECCCCCEEEEEEECCCCCCCEEECCHHHHHHH FETSPGISIEEFRRCIPLERVSGGYRLSCLNPSE HHCCCCCCHHHHHHHCCHHHCCCCEEEEEECCCC >Mature Secondary Structure SNDFEREMVVCMNRFFTENRMKGFAYRLKQSHFNTQYVDIIVDSLDPAYYLAIECKSLN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEEEECCC GKRLYFTSNFHKDKDGVHQVDNISGFVKYTGRRGYLAVEFRGQGAKNEAYLMPWTKVLEF CCEEEEECCCCCCCCCCHHHCCCCEEEEECCCCCEEEEEEECCCCCCCEEECCHHHHHHH FETSPGISIEEFRRCIPLERVSGGYRLSCLNPSE HHCCCCCCHHHHHHHCCHHHCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA