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The map label for this gene is 124485913

Identifier: 124485913

GI number: 124485913

Start: 1106337

End: 1107467

Strand: Reverse

Name: 124485913

Synonym: Mlab_1093

Alternate gene names: NA

Gene position: 1107467-1106337 (Counterclockwise)

Preceding gene: 124485922

Following gene: 124485912

Centisome position: 61.36

GC content: 47.04

Gene sequence:

>1131_bases
ATGAGGAAAATTGTTACTGTACTTTTACTGCTTGCTCTGACTCTCGTTTGTATGTCTGCAGGCTGCGTAAGCACCTCTGA
AGAAACCGGTGGTGGTACCATCACCATAACCGACTCGGGTGGTCGAGTGGTCGTTGTTCCCGACAATCCTGAAAGAATCG
CCGTCAGCGGCTCGGGCTCGACACGTTATTTTGCCTATCTCAACGTGACCGACAGGCTCGTTGCTATTGATTATCAGGAC
AGCAATCTTCTTAACTTCCCTAATGATGTTCGTCCCTACATGCTCGCCCATCCAGAAATCAAAGACCTCCCGGCTCTTGG
AACCGCAAAAGGTGTCGTTGATGCAGAGAAACTTCTGTCAATCAATCCCGATATTTTGTTCATGGCGGGATACAGTGATA
CCGCAATCCAGTCGGCAAACGAGATTCAGGAAAAAACCGGGATCCCTGTGGTTCTTTTCTACGCGGGAGATTATGTCACC
AACGGAGACAAAGTAGCCTCATCCCTGAAAATGATTGGTAATATTCTCCACGTGGATAAACGTGCGGATGATGTCATACA
ATACTTTGCTGATGTGCGTGCCGATTTGGAAACCCGAACTGCGGGCATTCCCGATGCAGAAAAACCATCCGTCTATGTTG
GCGGGATTTCCTATAGCGGGGCACATGGTCTCGATGGAACTGATCCAACATATTATCCGTTCACTGTCCTTCATGCAATG
AATGTTGCCTCGGTAATAAATGCAACAACGAGTACCGGATATGCGGCGATCTCAAAGGAACAGATTCTTGGATGGGATCC
TGATATCATCTTTGTTGACCTAGGTACTATGAATGCTGCCGGAGGCGGAGCAATTATAGAATTGCAGACCGATCCATCCT
ATCAGGAACTGACAGCGGTAAAGACCGGTGAAGTGTATGCGGTCAATCCCCACACCTCAATGGGTACGAACCATGAAACA
AGTATGGCAAATGCCTACTACATCGGCACGATTCTTTATCCAGAACAGTTTGCCGATATTAACCCGGCAGAAAAAGCAAA
TGAGATTTACACGTTTATTGACGGAGCTCCAGTCTACGAACAACTGAAAGCAAACCTGAACAATCTCTCCTATACGAAAC
TCGTAGTGTAA

Upstream 100 bases:

>100_bases
GATATAATAATCATACGAAAATATACATTGCATGTTTTAATTATGGGGAAAATAGAAATACATATTACCTATTGTGACAA
AACTCTAGAATGTTAATACT

Downstream 100 bases:

>100_bases
CTATGAACAAAAAAATTATCTCCTTATTTTTTGCAGGTCTTTGTGTGCTTGCATTATGCATGTGCGCAGGTTGTGTTGGC
GGTACCCCTGATGCAGGAGA

Product: V-type ATPase, 116 kDa subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MRKIVTVLLLLALTLVCMSAGCVSTSEETGGGTITITDSGGRVVVVPDNPERIAVSGSGSTRYFAYLNVTDRLVAIDYQD
SNLLNFPNDVRPYMLAHPEIKDLPALGTAKGVVDAEKLLSINPDILFMAGYSDTAIQSANEIQEKTGIPVVLFYAGDYVT
NGDKVASSLKMIGNILHVDKRADDVIQYFADVRADLETRTAGIPDAEKPSVYVGGISYSGAHGLDGTDPTYYPFTVLHAM
NVASVINATTSTGYAAISKEQILGWDPDIIFVDLGTMNAAGGGAIIELQTDPSYQELTAVKTGEVYAVNPHTSMGTNHET
SMANAYYIGTILYPEQFADINPAEKANEIYTFIDGAPVYEQLKANLNNLSYTKLVV

Sequences:

>Translated_376_residues
MRKIVTVLLLLALTLVCMSAGCVSTSEETGGGTITITDSGGRVVVVPDNPERIAVSGSGSTRYFAYLNVTDRLVAIDYQD
SNLLNFPNDVRPYMLAHPEIKDLPALGTAKGVVDAEKLLSINPDILFMAGYSDTAIQSANEIQEKTGIPVVLFYAGDYVT
NGDKVASSLKMIGNILHVDKRADDVIQYFADVRADLETRTAGIPDAEKPSVYVGGISYSGAHGLDGTDPTYYPFTVLHAM
NVASVINATTSTGYAAISKEQILGWDPDIIFVDLGTMNAAGGGAIIELQTDPSYQELTAVKTGEVYAVNPHTSMGTNHET
SMANAYYIGTILYPEQFADINPAEKANEIYTFIDGAPVYEQLKANLNNLSYTKLVV
>Mature_376_residues
MRKIVTVLLLLALTLVCMSAGCVSTSEETGGGTITITDSGGRVVVVPDNPERIAVSGSGSTRYFAYLNVTDRLVAIDYQD
SNLLNFPNDVRPYMLAHPEIKDLPALGTAKGVVDAEKLLSINPDILFMAGYSDTAIQSANEIQEKTGIPVVLFYAGDYVT
NGDKVASSLKMIGNILHVDKRADDVIQYFADVRADLETRTAGIPDAEKPSVYVGGISYSGAHGLDGTDPTYYPFTVLHAM
NVASVINATTSTGYAAISKEQILGWDPDIIFVDLGTMNAAGGGAIIELQTDPSYQELTAVKTGEVYAVNPHTSMGTNHET
SMANAYYIGTILYPEQFADINPAEKANEIYTFIDGAPVYEQLKANLNNLSYTKLVV

Specific function: Unknown

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 40349; Mature: 40349

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIVTVLLLLALTLVCMSAGCVSTSEETGGGTITITDSGGRVVVVPDNPERIAVSGSGS
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCEEEEECCCC
TRYFAYLNVTDRLVAIDYQDSNLLNFPNDVRPYMLAHPEIKDLPALGTAKGVVDAEKLLS
EEEEEEEEECCEEEEEEECCCCCCCCCCCCCCEEEECCCHHCCCCCCCCCCCCCHHHHHC
INPDILFMAGYSDTAIQSANEIQEKTGIPVVLFYAGDYVTNGDKVASSLKMIGNILHVDK
CCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCEEECHHHHHHHHHHHHHHHHCCC
RADDVIQYFADVRADLETRTAGIPDAEKPSVYVGGISYSGAHGLDGTDPTYYPFTVLHAM
HHHHHHHHHHHHHHCHHHHCCCCCCCCCCEEEECCEEECCCCCCCCCCCCCCHHHHHHHH
NVASVINATTSTGYAAISKEQILGWDPDIIFVDLGTMNAAGGGAIIELQTDPSYQELTAV
HHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCHHHEEEE
KTGEVYAVNPHTSMGTNHETSMANAYYIGTILYPEQFADINPAEKANEIYTFIDGAPVYE
ECCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCHHHCCCCCHHHCCCEEEEECCCCHHH
QLKANLNNLSYTKLVV
HHHHCCCCCCEEEEEC
>Mature Secondary Structure
MRKIVTVLLLLALTLVCMSAGCVSTSEETGGGTITITDSGGRVVVVPDNPERIAVSGSGS
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCEEEEECCCC
TRYFAYLNVTDRLVAIDYQDSNLLNFPNDVRPYMLAHPEIKDLPALGTAKGVVDAEKLLS
EEEEEEEEECCEEEEEEECCCCCCCCCCCCCCEEEECCCHHCCCCCCCCCCCCCHHHHHC
INPDILFMAGYSDTAIQSANEIQEKTGIPVVLFYAGDYVTNGDKVASSLKMIGNILHVDK
CCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCEEECHHHHHHHHHHHHHHHHCCC
RADDVIQYFADVRADLETRTAGIPDAEKPSVYVGGISYSGAHGLDGTDPTYYPFTVLHAM
HHHHHHHHHHHHHHCHHHHCCCCCCCCCCEEEECCEEECCCCCCCCCCCCCCHHHHHHHH
NVASVINATTSTGYAAISKEQILGWDPDIIFVDLGTMNAAGGGAIIELQTDPSYQELTAV
HHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCHHHEEEE
KTGEVYAVNPHTSMGTNHETSMANAYYIGTILYPEQFADINPAEKANEIYTFIDGAPVYE
ECCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCHHHCCCCCHHHCCCEEEEECCCCHHH
QLKANLNNLSYTKLVV
HHHHCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]