| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
Click here to switch to the map view.
The map label for this gene is 124485922
Identifier: 124485922
GI number: 124485922
Start: 1113991
End: 1114977
Strand: Reverse
Name: 124485922
Synonym: Mlab_1102
Alternate gene names: NA
Gene position: 1114977-1113991 (Counterclockwise)
Preceding gene: 124485923
Following gene: 124485913
Centisome position: 61.77
GC content: 50.56
Gene sequence:
>987_bases ATGGACCTTCGTCTGCTCATATTTCCCCTCCTTGTCTTCCTTGGCGGCTGTTGTTACGGACCTTCATCGCCCACAATAAA ACTAGCGTATGCTGCCGGCTATTCCTGGACGGATGTGGTCATGAGTCAGTATTTTTACGGATGGCTGATACTGTTCGTTA TCTTTGTTGGTCTTTTCCTTCTTCGCTTGATTCGAAAACAACAGACCATTCCTGCAAAAAATCCCCGTCCCCTCCTGCGC CGCATACCAGGTCTTGCACTTGCCGGAACCTGCATCTCTCTTGTTACCGTGACGTATTGTCTTTCTCTGCAGAGCGTTCC TGCATACATCTCGGTGATTCTTCTCTTTCAGTTTACCTGGATGGGGGTTTTGATTCAGGCAATAACCGAACAGCGGCTTC CGGAGCCGAAGATGATTCTCGCGGTTGTTATTCTCGTGATCGGCACCTTCCTTGCGGCGGGTTTTGCCGGACTGGACGGG CCGCTTGACCCGTCTGGTGTGATCTTTGGACTTCTTTCCGCTCTTCTGTATGCAATGTATATGTTCATGCTCGGCCGGTT CGAGATTGGAATGCATCCGTTGAACAGAAGTTTTCTTATTCTCAGCTGCGCTCTCCTGCTCCTGACATTCCTCTTTACCC CCGCCTACTTCATGCAGGGCACGTTCGTCACCGGCATTTGGCAGTATGGAATCATTCTGGGATCGATTGGGTGTATTCTC CCGATGTGCCTCTTCGCGATAGCCGCACCGAGGATCTCGACTGGAGCAACAACGATCCTCAGTTCATCGGAACTGCCGGC ATCCATCATCTGCGCCGTGCTTTTTCTTGGCGAAACAGTATCATGGATCCAGTATGCAGGAATGGTTCTACTAACTATCG GCATCGCGTATCCTCAATACCACCCGCATCCAAGACAAAAACAGATCCGGAAAGGTGTGGGCATGCAAAGATTTCTGCAT CCTCACGCCCGTGCAAAAATAAGATGA
Upstream 100 bases:
>100_bases TTACAGCTCGAAAAAAGCTCGTTACGACGGCATATTTCGTAATTATTTTGCATCACCTGCTGGTTTAATCCATGTGAACA GCAAATAATAAGGGACTGAA
Downstream 100 bases:
>100_bases GTGAGTCTTGAATAGTATATGAATGAAATGCGGGTTACTGGAATTTAAGAGAGAATTGTCTCTTCAAGAATATCATCTTC GATAAACCGTTTGCCGCCGT
Product: 5-formyltetrahydrofolate cyclo-ligase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MDLRLLIFPLLVFLGGCCYGPSSPTIKLAYAAGYSWTDVVMSQYFYGWLILFVIFVGLFLLRLIRKQQTIPAKNPRPLLR RIPGLALAGTCISLVTVTYCLSLQSVPAYISVILLFQFTWMGVLIQAITEQRLPEPKMILAVVILVIGTFLAAGFAGLDG PLDPSGVIFGLLSALLYAMYMFMLGRFEIGMHPLNRSFLILSCALLLLTFLFTPAYFMQGTFVTGIWQYGIILGSIGCIL PMCLFAIAAPRISTGATTILSSSELPASIICAVLFLGETVSWIQYAGMVLLTIGIAYPQYHPHPRQKQIRKGVGMQRFLH PHARAKIR
Sequences:
>Translated_328_residues MDLRLLIFPLLVFLGGCCYGPSSPTIKLAYAAGYSWTDVVMSQYFYGWLILFVIFVGLFLLRLIRKQQTIPAKNPRPLLR RIPGLALAGTCISLVTVTYCLSLQSVPAYISVILLFQFTWMGVLIQAITEQRLPEPKMILAVVILVIGTFLAAGFAGLDG PLDPSGVIFGLLSALLYAMYMFMLGRFEIGMHPLNRSFLILSCALLLLTFLFTPAYFMQGTFVTGIWQYGIILGSIGCIL PMCLFAIAAPRISTGATTILSSSELPASIICAVLFLGETVSWIQYAGMVLLTIGIAYPQYHPHPRQKQIRKGVGMQRFLH PHARAKIR >Mature_328_residues MDLRLLIFPLLVFLGGCCYGPSSPTIKLAYAAGYSWTDVVMSQYFYGWLILFVIFVGLFLLRLIRKQQTIPAKNPRPLLR RIPGLALAGTCISLVTVTYCLSLQSVPAYISVILLFQFTWMGVLIQAITEQRLPEPKMILAVVILVIGTFLAAGFAGLDG PLDPSGVIFGLLSALLYAMYMFMLGRFEIGMHPLNRSFLILSCALLLLTFLFTPAYFMQGTFVTGIWQYGIILGSIGCIL PMCLFAIAAPRISTGATTILSSSELPASIICAVLFLGETVSWIQYAGMVLLTIGIAYPQYHPHPRQKQIRKGVGMQRFLH PHARAKIR
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36239; Mature: 36239
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLRLLIFPLLVFLGGCCYGPSSPTIKLAYAAGYSWTDVVMSQYFYGWLILFVIFVGLFL CCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH LRLIRKQQTIPAKNPRPLLRRIPGLALAGTCISLVTVTYCLSLQSVPAYISVILLFQFTW HHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MGVLIQAITEQRLPEPKMILAVVILVIGTFLAAGFAGLDGPLDPSGVIFGLLSALLYAMY HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH MFMLGRFEIGMHPLNRSFLILSCALLLLTFLFTPAYFMQGTFVTGIWQYGIILGSIGCIL HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH PMCLFAIAAPRISTGATTILSSSELPASIICAVLFLGETVSWIQYAGMVLLTIGIAYPQY HHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC HPHPRQKQIRKGVGMQRFLHPHARAKIR CCCCHHHHHHHCCCHHHHHCHHHHCCCC >Mature Secondary Structure MDLRLLIFPLLVFLGGCCYGPSSPTIKLAYAAGYSWTDVVMSQYFYGWLILFVIFVGLFL CCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH LRLIRKQQTIPAKNPRPLLRRIPGLALAGTCISLVTVTYCLSLQSVPAYISVILLFQFTW HHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MGVLIQAITEQRLPEPKMILAVVILVIGTFLAAGFAGLDGPLDPSGVIFGLLSALLYAMY HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH MFMLGRFEIGMHPLNRSFLILSCALLLLTFLFTPAYFMQGTFVTGIWQYGIILGSIGCIL HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH PMCLFAIAAPRISTGATTILSSSELPASIICAVLFLGETVSWIQYAGMVLLTIGIAYPQY HHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC HPHPRQKQIRKGVGMQRFLHPHARAKIR CCCCHHHHHHHCCCHHHHHCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA