Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

Click here to switch to the map view.

The map label for this gene is 124485922

Identifier: 124485922

GI number: 124485922

Start: 1113991

End: 1114977

Strand: Reverse

Name: 124485922

Synonym: Mlab_1102

Alternate gene names: NA

Gene position: 1114977-1113991 (Counterclockwise)

Preceding gene: 124485923

Following gene: 124485913

Centisome position: 61.77

GC content: 50.56

Gene sequence:

>987_bases
ATGGACCTTCGTCTGCTCATATTTCCCCTCCTTGTCTTCCTTGGCGGCTGTTGTTACGGACCTTCATCGCCCACAATAAA
ACTAGCGTATGCTGCCGGCTATTCCTGGACGGATGTGGTCATGAGTCAGTATTTTTACGGATGGCTGATACTGTTCGTTA
TCTTTGTTGGTCTTTTCCTTCTTCGCTTGATTCGAAAACAACAGACCATTCCTGCAAAAAATCCCCGTCCCCTCCTGCGC
CGCATACCAGGTCTTGCACTTGCCGGAACCTGCATCTCTCTTGTTACCGTGACGTATTGTCTTTCTCTGCAGAGCGTTCC
TGCATACATCTCGGTGATTCTTCTCTTTCAGTTTACCTGGATGGGGGTTTTGATTCAGGCAATAACCGAACAGCGGCTTC
CGGAGCCGAAGATGATTCTCGCGGTTGTTATTCTCGTGATCGGCACCTTCCTTGCGGCGGGTTTTGCCGGACTGGACGGG
CCGCTTGACCCGTCTGGTGTGATCTTTGGACTTCTTTCCGCTCTTCTGTATGCAATGTATATGTTCATGCTCGGCCGGTT
CGAGATTGGAATGCATCCGTTGAACAGAAGTTTTCTTATTCTCAGCTGCGCTCTCCTGCTCCTGACATTCCTCTTTACCC
CCGCCTACTTCATGCAGGGCACGTTCGTCACCGGCATTTGGCAGTATGGAATCATTCTGGGATCGATTGGGTGTATTCTC
CCGATGTGCCTCTTCGCGATAGCCGCACCGAGGATCTCGACTGGAGCAACAACGATCCTCAGTTCATCGGAACTGCCGGC
ATCCATCATCTGCGCCGTGCTTTTTCTTGGCGAAACAGTATCATGGATCCAGTATGCAGGAATGGTTCTACTAACTATCG
GCATCGCGTATCCTCAATACCACCCGCATCCAAGACAAAAACAGATCCGGAAAGGTGTGGGCATGCAAAGATTTCTGCAT
CCTCACGCCCGTGCAAAAATAAGATGA

Upstream 100 bases:

>100_bases
TTACAGCTCGAAAAAAGCTCGTTACGACGGCATATTTCGTAATTATTTTGCATCACCTGCTGGTTTAATCCATGTGAACA
GCAAATAATAAGGGACTGAA

Downstream 100 bases:

>100_bases
GTGAGTCTTGAATAGTATATGAATGAAATGCGGGTTACTGGAATTTAAGAGAGAATTGTCTCTTCAAGAATATCATCTTC
GATAAACCGTTTGCCGCCGT

Product: 5-formyltetrahydrofolate cyclo-ligase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MDLRLLIFPLLVFLGGCCYGPSSPTIKLAYAAGYSWTDVVMSQYFYGWLILFVIFVGLFLLRLIRKQQTIPAKNPRPLLR
RIPGLALAGTCISLVTVTYCLSLQSVPAYISVILLFQFTWMGVLIQAITEQRLPEPKMILAVVILVIGTFLAAGFAGLDG
PLDPSGVIFGLLSALLYAMYMFMLGRFEIGMHPLNRSFLILSCALLLLTFLFTPAYFMQGTFVTGIWQYGIILGSIGCIL
PMCLFAIAAPRISTGATTILSSSELPASIICAVLFLGETVSWIQYAGMVLLTIGIAYPQYHPHPRQKQIRKGVGMQRFLH
PHARAKIR

Sequences:

>Translated_328_residues
MDLRLLIFPLLVFLGGCCYGPSSPTIKLAYAAGYSWTDVVMSQYFYGWLILFVIFVGLFLLRLIRKQQTIPAKNPRPLLR
RIPGLALAGTCISLVTVTYCLSLQSVPAYISVILLFQFTWMGVLIQAITEQRLPEPKMILAVVILVIGTFLAAGFAGLDG
PLDPSGVIFGLLSALLYAMYMFMLGRFEIGMHPLNRSFLILSCALLLLTFLFTPAYFMQGTFVTGIWQYGIILGSIGCIL
PMCLFAIAAPRISTGATTILSSSELPASIICAVLFLGETVSWIQYAGMVLLTIGIAYPQYHPHPRQKQIRKGVGMQRFLH
PHARAKIR
>Mature_328_residues
MDLRLLIFPLLVFLGGCCYGPSSPTIKLAYAAGYSWTDVVMSQYFYGWLILFVIFVGLFLLRLIRKQQTIPAKNPRPLLR
RIPGLALAGTCISLVTVTYCLSLQSVPAYISVILLFQFTWMGVLIQAITEQRLPEPKMILAVVILVIGTFLAAGFAGLDG
PLDPSGVIFGLLSALLYAMYMFMLGRFEIGMHPLNRSFLILSCALLLLTFLFTPAYFMQGTFVTGIWQYGIILGSIGCIL
PMCLFAIAAPRISTGATTILSSSELPASIICAVLFLGETVSWIQYAGMVLLTIGIAYPQYHPHPRQKQIRKGVGMQRFLH
PHARAKIR

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36239; Mature: 36239

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLRLLIFPLLVFLGGCCYGPSSPTIKLAYAAGYSWTDVVMSQYFYGWLILFVIFVGLFL
CCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LRLIRKQQTIPAKNPRPLLRRIPGLALAGTCISLVTVTYCLSLQSVPAYISVILLFQFTW
HHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGVLIQAITEQRLPEPKMILAVVILVIGTFLAAGFAGLDGPLDPSGVIFGLLSALLYAMY
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
MFMLGRFEIGMHPLNRSFLILSCALLLLTFLFTPAYFMQGTFVTGIWQYGIILGSIGCIL
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
PMCLFAIAAPRISTGATTILSSSELPASIICAVLFLGETVSWIQYAGMVLLTIGIAYPQY
HHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
HPHPRQKQIRKGVGMQRFLHPHARAKIR
CCCCHHHHHHHCCCHHHHHCHHHHCCCC
>Mature Secondary Structure
MDLRLLIFPLLVFLGGCCYGPSSPTIKLAYAAGYSWTDVVMSQYFYGWLILFVIFVGLFL
CCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LRLIRKQQTIPAKNPRPLLRRIPGLALAGTCISLVTVTYCLSLQSVPAYISVILLFQFTW
HHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGVLIQAITEQRLPEPKMILAVVILVIGTFLAAGFAGLDGPLDPSGVIFGLLSALLYAMY
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
MFMLGRFEIGMHPLNRSFLILSCALLLLTFLFTPAYFMQGTFVTGIWQYGIILGSIGCIL
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
PMCLFAIAAPRISTGATTILSSSELPASIICAVLFLGETVSWIQYAGMVLLTIGIAYPQY
HHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
HPHPRQKQIRKGVGMQRFLHPHARAKIR
CCCCHHHHHHHCCCHHHHHCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA