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The map label for this gene is cbiM [H]

Identifier: 124485905

GI number: 124485905

Start: 1099924

End: 1100619

Strand: Reverse

Name: cbiM [H]

Synonym: Mlab_1085

Alternate gene names: 124485905

Gene position: 1100619-1099924 (Counterclockwise)

Preceding gene: 124485906

Following gene: 124485904

Centisome position: 60.98

GC content: 49.28

Gene sequence:

>696_bases
ATGCATATTATGGAGGGGTATTTACCCATCGGCTGGTGTATATTCTGGGCTGTTCTTTCAGCTCCGTTTGTCATCTACGG
CATCTGGAAAATGACTAAAATGATTCAGGAGGATCGGCGTGTCCTCCCGTTGATGGCAGTGTGCGGAGCATTTGTCTTTG
TACTTTCTGCCCTCAAAATCCCGTCAGTAACGGGAAGCTGTTCTCACCCGACGGGAACCGGTCTTTCAGCTGCGTTCTTT
GGACCGTTCATCACATCGGTTCTCGGCACGATCGTTCTGTTATTTCAAGCCCTGCTGCTGGCACACGGCGGACTGACGAC
ACTTGGAGCAAACGTCTTTTCCATGGCCATTGCTGGTCCTTTTATTGCCTGGCTCGTCTTTGTAGGTCTTAGAAAAACCG
GCAAGGTCGGCATCGGAGTTGCCGTGTTTATCACCGCAGCTGTCGCAAATTTAGTTACCTACACCGTCACCTCACTGCAG
CTCGCATTAGTGTTTCCGGTCGAAGGAAGTATTCTCAATGCATTCATCGCATTCGCAGGTATCTTTGCCGTAACCCAGAT
TCCTCTCGCTATTATCGAGGGTATCATCTGTGCACTCGTCGCAAAGTACATCGTCCGCGTAAAGCCGGAGATCTTAAAGA
AACTCGGTATTATTCAGGATGAAGAGATCGCAAAAATCCAGGGAGAAGCAGTATGA

Upstream 100 bases:

>100_bases
ACACTTTTTTGCAATCCAACCATGTTAACAAATAAATTTTCCAATTGTAAATAAAAATCAAGTACTCATCAATTATATAT
TTGTTAAGACAATTTTTATT

Downstream 100 bases:

>100_bases
AAAAATCACATCTTGAAATTCTTGTGGGTGTCCTTGTCATCGTTCTGCTCGTTGTTGCCACACTTGCCATAGTTCAATCC
GGTACTGGTGATGAAGAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MHIMEGYLPIGWCIFWAVLSAPFVIYGIWKMTKMIQEDRRVLPLMAVCGAFVFVLSALKIPSVTGSCSHPTGTGLSAAFF
GPFITSVLGTIVLLFQALLLAHGGLTTLGANVFSMAIAGPFIAWLVFVGLRKTGKVGIGVAVFITAAVANLVTYTVTSLQ
LALVFPVEGSILNAFIAFAGIFAVTQIPLAIIEGIICALVAKYIVRVKPEILKKLGIIQDEEIAKIQGEAV

Sequences:

>Translated_231_residues
MHIMEGYLPIGWCIFWAVLSAPFVIYGIWKMTKMIQEDRRVLPLMAVCGAFVFVLSALKIPSVTGSCSHPTGTGLSAAFF
GPFITSVLGTIVLLFQALLLAHGGLTTLGANVFSMAIAGPFIAWLVFVGLRKTGKVGIGVAVFITAAVANLVTYTVTSLQ
LALVFPVEGSILNAFIAFAGIFAVTQIPLAIIEGIICALVAKYIVRVKPEILKKLGIIQDEEIAKIQGEAV
>Mature_231_residues
MHIMEGYLPIGWCIFWAVLSAPFVIYGIWKMTKMIQEDRRVLPLMAVCGAFVFVLSALKIPSVTGSCSHPTGTGLSAAFF
GPFITSVLGTIVLLFQALLLAHGGLTTLGANVFSMAIAGPFIAWLVFVGLRKTGKVGIGVAVFITAAVANLVTYTVTSLQ
LALVFPVEGSILNAFIAFAGIFAVTQIPLAIIEGIICALVAKYIVRVKPEILKKLGIIQDEEIAKIQGEAV

Specific function: Unknown

COG id: COG0310

COG function: function code P; ABC-type Co2+ transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiM family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002751
- InterPro:   IPR018024 [H]

Pfam domain/function: PF01891 CbiM [H]

EC number: NA

Molecular weight: Translated: 24570; Mature: 24570

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIMEGYLPIGWCIFWAVLSAPFVIYGIWKMTKMIQEDRRVLPLMAVCGAFVFVLSALKI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PSVTGSCSHPTGTGLSAAFFGPFITSVLGTIVLLFQALLLAHGGLTTLGANVFSMAIAGP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FIAWLVFVGLRKTGKVGIGVAVFITAAVANLVTYTVTSLQLALVFPVEGSILNAFIAFAG
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHH
IFAVTQIPLAIIEGIICALVAKYIVRVKPEILKKLGIIQDEEIAKIQGEAV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHCCCCC
>Mature Secondary Structure
MHIMEGYLPIGWCIFWAVLSAPFVIYGIWKMTKMIQEDRRVLPLMAVCGAFVFVLSALKI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PSVTGSCSHPTGTGLSAAFFGPFITSVLGTIVLLFQALLLAHGGLTTLGANVFSMAIAGP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FIAWLVFVGLRKTGKVGIGVAVFITAAVANLVTYTVTSLQLALVFPVEGSILNAFIAFAG
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHH
IFAVTQIPLAIIEGIICALVAKYIVRVKPEILKKLGIIQDEEIAKIQGEAV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]