Click here to switch to the map view.

The map label for this gene is cbiX [H]

Identifier: 124485906

GI number: 124485906

Start: 1100731

End: 1101138

Strand: Reverse

Name: cbiX [H]

Synonym: Mlab_1086

Alternate gene names: 124485906

Gene position: 1101138-1100731 (Counterclockwise)

Preceding gene: 124485907

Following gene: 124485905

Centisome position: 61.01

GC content: 44.85

Gene sequence:

>408_bases
ATGCGCAAACACGGTTTACTTCTGATAGGTCATGGAAGCAGACTCAATTATAATAAAGAGCTCATCACTTCAACCGCTGA
ATTGATGACCAAGAAGACGGATGAATATCTGATAAAAACATGTTTTATGGAAAACTGTTCCCCGACAGTTCTGGAAGGAC
TGGATTCCATGAAAACCGAGGATATCGATCGACTGGTTGTTGTTCCGCTGTTCCTTGCCAAAGGCGTTCACGTACTTATG
GACATTCCCGAGCTTCTCGATTTGAAATCAGGTGAGTCGCGTGGAAGTTTTGTTCTTGCAGACGGAACAAAAATTCCTCT
CGTGTATGCCGAACCTATTGGCAAAGATCCGCTTCTCGCCGACATAATGCTGAAAAACGCCAATGCCGCGCTGAATACCC
ATCTCTGA

Upstream 100 bases:

>100_bases
ATTCCCGAGGTATTGATGAGTCAAAACAGTTTCTCAAAACAGAATGAGACTGCAAACATAAAACCAACTTGATTTATAGT
AAGTGAATCATACCATATGT

Downstream 100 bases:

>100_bases
TTCACCCATTCACACTTTTTTGCAATCCAACCATGTTAACAAATAAATTTTCCAATTGTAAATAAAAATCAAGTACTCAT
CAATTATATATTTGTTAAGA

Product: sirohydrochlorin cobaltochelatase

Products: NA

Alternate protein names: CbiXS [H]

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MRKHGLLLIGHGSRLNYNKELITSTAELMTKKTDEYLIKTCFMENCSPTVLEGLDSMKTEDIDRLVVVPLFLAKGVHVLM
DIPELLDLKSGESRGSFVLADGTKIPLVYAEPIGKDPLLADIMLKNANAALNTHL

Sequences:

>Translated_135_residues
MRKHGLLLIGHGSRLNYNKELITSTAELMTKKTDEYLIKTCFMENCSPTVLEGLDSMKTEDIDRLVVVPLFLAKGVHVLM
DIPELLDLKSGESRGSFVLADGTKIPLVYAEPIGKDPLLADIMLKNANAALNTHL
>Mature_135_residues
MRKHGLLLIGHGSRLNYNKELITSTAELMTKKTDEYLIKTCFMENCSPTVLEGLDSMKTEDIDRLVVVPLFLAKGVHVLM
DIPELLDLKSGESRGSFVLADGTKIPLVYAEPIGKDPLLADIMLKNANAALNTHL

Specific function: Chelates cobalt to the cobalamin precursor as part of the anaerobic pathway to cobalamin biosynthesis [H]

COG id: COG2138

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiX family. CbiXS subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002762 [H]

Pfam domain/function: PF01903 CbiX [H]

EC number: =4.99.1.3 [H]

Molecular weight: Translated: 14894; Mature: 14894

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKHGLLLIGHGSRLNYNKELITSTAELMTKKTDEYLIKTCFMENCSPTVLEGLDSMKTE
CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHCCCC
DIDRLVVVPLFLAKGVHVLMDIPELLDLKSGESRGSFVLADGTKIPLVYAEPIGKDPLLA
CCHHHHHHHHHHHCCHHEEECCHHHHCCCCCCCCCCEEEECCCEEEEEEECCCCCCCCEE
DIMLKNANAALNTHL
HHEECCCCCEEECCC
>Mature Secondary Structure
MRKHGLLLIGHGSRLNYNKELITSTAELMTKKTDEYLIKTCFMENCSPTVLEGLDSMKTE
CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHCCCC
DIDRLVVVPLFLAKGVHVLMDIPELLDLKSGESRGSFVLADGTKIPLVYAEPIGKDPLLA
CCHHHHHHHHHHHCCHHEEECCHHHHCCCCCCCCCCEEEECCCEEEEEEECCCCCCCCEE
DIMLKNANAALNTHL
HHEECCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA