Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

Click here to switch to the map view.

The map label for this gene is 124485854

Identifier: 124485854

GI number: 124485854

Start: 1043644

End: 1043901

Strand: Reverse

Name: 124485854

Synonym: Mlab_1034

Alternate gene names: NA

Gene position: 1043901-1043644 (Counterclockwise)

Preceding gene: 124485856

Following gene: 124485852

Centisome position: 57.84

GC content: 49.61

Gene sequence:

>258_bases
TTGCGACATGCTGCGGGAGCCAAAGGCGACCAAAGCTATCCTATTTTTATCGAAGCCGGCACACTGCTCGAAGGCGTCCG
CTCTGTATATAGTATCGTTATCGTATGGTATTTCGATATTTGGCGGGAGTTCTTCGGCGGTGTGCCGACCTCTACTACTA
TATTGGACGGGAAACGGGATATAACGCGGGGGAAATGTCTTGATTTCTCTGTATTTTTTATGGCGGGTCGGACGCTGAAA
GCGTACGACATCAGCTGA

Upstream 100 bases:

>100_bases
CGCGCTGAGGGGGCCGAAGGCAACCGAAGCGATGAGCAAATCTTTGATTTGCGAGCGGGCAACCCCATAAGGGGCGGCCT
CAGCCAAGCAAATCTCTGAT

Downstream 100 bases:

>100_bases
GCAAGTCTTCAGACTTGCGAGTCAAATCTTCGATTTCGTGTGTGGGATATCTTTAGACACATGAAAAAAACCAACCGCGA
ATCGGCGCGAATCCCGCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MRHAAGAKGDQSYPIFIEAGTLLEGVRSVYSIVIVWYFDIWREFFGGVPTSTTILDGKRDITRGKCLDFSVFFMAGRTLK
AYDIS

Sequences:

>Translated_85_residues
MRHAAGAKGDQSYPIFIEAGTLLEGVRSVYSIVIVWYFDIWREFFGGVPTSTTILDGKRDITRGKCLDFSVFFMAGRTLK
AYDIS
>Mature_85_residues
MRHAAGAKGDQSYPIFIEAGTLLEGVRSVYSIVIVWYFDIWREFFGGVPTSTTILDGKRDITRGKCLDFSVFFMAGRTLK
AYDIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9561; Mature: 9561

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHAAGAKGDQSYPIFIEAGTLLEGVRSVYSIVIVWYFDIWREFFGGVPTSTTILDGKRD
CCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCC
ITRGKCLDFSVFFMAGRTLKAYDIS
CCCCCCCCCEEEECCCCEEEEEECC
>Mature Secondary Structure
MRHAAGAKGDQSYPIFIEAGTLLEGVRSVYSIVIVWYFDIWREFFGGVPTSTTILDGKRD
CCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCC
ITRGKCLDFSVFFMAGRTLKAYDIS
CCCCCCCCCEEEECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA