Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124485856

Identifier: 124485856

GI number: 124485856

Start: 1044889

End: 1045455

Strand: Reverse

Name: 124485856

Synonym: Mlab_1036

Alternate gene names: NA

Gene position: 1045455-1044889 (Counterclockwise)

Preceding gene: 124485859

Following gene: 124485854

Centisome position: 57.92

GC content: 32.8

Gene sequence:

>567_bases
ATGAGTGGGAACACCTTGAAATACAATAAATCACATATGAATTGTCTGTCACAAGACAAAAAAATAGAAAATGAGGTAAT
AATTATGAGTGAATTGATTTATGATATTGATGGAAACATGGGTAAAATTCTGAAAGTTTATGAAAACAGATGTTTAATTT
CAGCCAAACCAGGTGTTAAAGGAGCATTGTTTGGTAGTTTGCTCAATGGAGATAAGGAATATTATTACTCTGATATTACA
TCAGTGCAATTCAAAAATCTTGGAGCAACCACGGGATTTTTACAATTCGAGTATGCTGGTTCTCACAGCAAAAACAATTT
TATCAACGAGAATAGTTTCACATTTGCGGCAACAGTCGGAACATCTAAGAATAAACAATTAAAAGAGCAGATGCCCGTAG
TATATGAATATATTCAAGACAGAGTTAGAGCATATAAAGAGGGAAAGAACAACACAGTTAGTACTTTATCGGTAGCAGAT
GAGCTGAAAAAGTTTAAAGAATTGTTAGATTGTGGTGTTATCTCCCAAGAAGAATTTGATACAAAGAAAAAACAGTTGTT
GGGATAA

Upstream 100 bases:

>100_bases
TGGGGGCAATAACAAATATAATTAACTACGTTTTCTATCTGTCTCAAAACAGTCCACATATTTTTCATGTTTTCCGCCAT
ATTTCCGTGAATTTTGTTAG

Downstream 100 bases:

>100_bases
TAATCATATATTGATACAGACATTTAGGATGCAGATGCTTTTCATTCTATCTGTAAATCCATTTTTATTCAGATTTTTTT
AATATGTGTGTTTGATGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MSGNTLKYNKSHMNCLSQDKKIENEVIIMSELIYDIDGNMGKILKVYENRCLISAKPGVKGALFGSLLNGDKEYYYSDIT
SVQFKNLGATTGFLQFEYAGSHSKNNFINENSFTFAATVGTSKNKQLKEQMPVVYEYIQDRVRAYKEGKNNTVSTLSVAD
ELKKFKELLDCGVISQEEFDTKKKQLLG

Sequences:

>Translated_188_residues
MSGNTLKYNKSHMNCLSQDKKIENEVIIMSELIYDIDGNMGKILKVYENRCLISAKPGVKGALFGSLLNGDKEYYYSDIT
SVQFKNLGATTGFLQFEYAGSHSKNNFINENSFTFAATVGTSKNKQLKEQMPVVYEYIQDRVRAYKEGKNNTVSTLSVAD
ELKKFKELLDCGVISQEEFDTKKKQLLG
>Mature_187_residues
SGNTLKYNKSHMNCLSQDKKIENEVIIMSELIYDIDGNMGKILKVYENRCLISAKPGVKGALFGSLLNGDKEYYYSDITS
VQFKNLGATTGFLQFEYAGSHSKNNFINENSFTFAATVGTSKNKQLKEQMPVVYEYIQDRVRAYKEGKNNTVSTLSVADE
LKKFKELLDCGVISQEEFDTKKKQLLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21220; Mature: 21089

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGNTLKYNKSHMNCLSQDKKIENEVIIMSELIYDIDGNMGKILKVYENRCLISAKPGVK
CCCCCEEECHHHHHHHHHHHHCCCCEEHHHHHHHHCCCCHHHHHHHHHCCEEEEECCCCC
GALFGSLLNGDKEYYYSDITSVQFKNLGATTGFLQFEYAGSHSKNNFINENSFTFAATVG
HHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEC
TSKNKQLKEQMPVVYEYIQDRVRAYKEGKNNTVSTLSVADELKKFKELLDCGVISQEEFD
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH
TKKKQLLG
HHHHHHCC
>Mature Secondary Structure 
SGNTLKYNKSHMNCLSQDKKIENEVIIMSELIYDIDGNMGKILKVYENRCLISAKPGVK
CCCCEEECHHHHHHHHHHHHCCCCEEHHHHHHHHCCCCHHHHHHHHHCCEEEEECCCCC
GALFGSLLNGDKEYYYSDITSVQFKNLGATTGFLQFEYAGSHSKNNFINENSFTFAATVG
HHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEC
TSKNKQLKEQMPVVYEYIQDRVRAYKEGKNNTVSTLSVADELKKFKELLDCGVISQEEFD
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH
TKKKQLLG
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA