| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485856
Identifier: 124485856
GI number: 124485856
Start: 1044889
End: 1045455
Strand: Reverse
Name: 124485856
Synonym: Mlab_1036
Alternate gene names: NA
Gene position: 1045455-1044889 (Counterclockwise)
Preceding gene: 124485859
Following gene: 124485854
Centisome position: 57.92
GC content: 32.8
Gene sequence:
>567_bases ATGAGTGGGAACACCTTGAAATACAATAAATCACATATGAATTGTCTGTCACAAGACAAAAAAATAGAAAATGAGGTAAT AATTATGAGTGAATTGATTTATGATATTGATGGAAACATGGGTAAAATTCTGAAAGTTTATGAAAACAGATGTTTAATTT CAGCCAAACCAGGTGTTAAAGGAGCATTGTTTGGTAGTTTGCTCAATGGAGATAAGGAATATTATTACTCTGATATTACA TCAGTGCAATTCAAAAATCTTGGAGCAACCACGGGATTTTTACAATTCGAGTATGCTGGTTCTCACAGCAAAAACAATTT TATCAACGAGAATAGTTTCACATTTGCGGCAACAGTCGGAACATCTAAGAATAAACAATTAAAAGAGCAGATGCCCGTAG TATATGAATATATTCAAGACAGAGTTAGAGCATATAAAGAGGGAAAGAACAACACAGTTAGTACTTTATCGGTAGCAGAT GAGCTGAAAAAGTTTAAAGAATTGTTAGATTGTGGTGTTATCTCCCAAGAAGAATTTGATACAAAGAAAAAACAGTTGTT GGGATAA
Upstream 100 bases:
>100_bases TGGGGGCAATAACAAATATAATTAACTACGTTTTCTATCTGTCTCAAAACAGTCCACATATTTTTCATGTTTTCCGCCAT ATTTCCGTGAATTTTGTTAG
Downstream 100 bases:
>100_bases TAATCATATATTGATACAGACATTTAGGATGCAGATGCTTTTCATTCTATCTGTAAATCCATTTTTATTCAGATTTTTTT AATATGTGTGTTTGATGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MSGNTLKYNKSHMNCLSQDKKIENEVIIMSELIYDIDGNMGKILKVYENRCLISAKPGVKGALFGSLLNGDKEYYYSDIT SVQFKNLGATTGFLQFEYAGSHSKNNFINENSFTFAATVGTSKNKQLKEQMPVVYEYIQDRVRAYKEGKNNTVSTLSVAD ELKKFKELLDCGVISQEEFDTKKKQLLG
Sequences:
>Translated_188_residues MSGNTLKYNKSHMNCLSQDKKIENEVIIMSELIYDIDGNMGKILKVYENRCLISAKPGVKGALFGSLLNGDKEYYYSDIT SVQFKNLGATTGFLQFEYAGSHSKNNFINENSFTFAATVGTSKNKQLKEQMPVVYEYIQDRVRAYKEGKNNTVSTLSVAD ELKKFKELLDCGVISQEEFDTKKKQLLG >Mature_187_residues SGNTLKYNKSHMNCLSQDKKIENEVIIMSELIYDIDGNMGKILKVYENRCLISAKPGVKGALFGSLLNGDKEYYYSDITS VQFKNLGATTGFLQFEYAGSHSKNNFINENSFTFAATVGTSKNKQLKEQMPVVYEYIQDRVRAYKEGKNNTVSTLSVADE LKKFKELLDCGVISQEEFDTKKKQLLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21220; Mature: 21089
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGNTLKYNKSHMNCLSQDKKIENEVIIMSELIYDIDGNMGKILKVYENRCLISAKPGVK CCCCCEEECHHHHHHHHHHHHCCCCEEHHHHHHHHCCCCHHHHHHHHHCCEEEEECCCCC GALFGSLLNGDKEYYYSDITSVQFKNLGATTGFLQFEYAGSHSKNNFINENSFTFAATVG HHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEC TSKNKQLKEQMPVVYEYIQDRVRAYKEGKNNTVSTLSVADELKKFKELLDCGVISQEEFD CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH TKKKQLLG HHHHHHCC >Mature Secondary Structure SGNTLKYNKSHMNCLSQDKKIENEVIIMSELIYDIDGNMGKILKVYENRCLISAKPGVK CCCCEEECHHHHHHHHHHHHCCCCEEHHHHHHHHCCCCHHHHHHHHHCCEEEEECCCCC GALFGSLLNGDKEYYYSDITSVQFKNLGATTGFLQFEYAGSHSKNNFINENSFTFAATVG HHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEC TSKNKQLKEQMPVVYEYIQDRVRAYKEGKNNTVSTLSVADELKKFKELLDCGVISQEEFD CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH TKKKQLLG HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA