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The map label for this gene is 124485852

Identifier: 124485852

GI number: 124485852

Start: 1040766

End: 1041812

Strand: Reverse

Name: 124485852

Synonym: Mlab_1032

Alternate gene names: NA

Gene position: 1041812-1040766 (Counterclockwise)

Preceding gene: 124485854

Following gene: 124485851

Centisome position: 57.72

GC content: 51.19

Gene sequence:

>1047_bases
ATGGAAATGTCGGAACTCACGCGAAAGATCGAACTGGCAACCAGCTCGCAATTTTTTGATCAGACTGGGCGAAACGAAGG
AAAAACCCATCAATGCACTCCGATGCGTATCCTTCTCGAAGGTACCTGTTCTTTTGACTGTGCCTACTGCCAGGTCTGCA
CGAAAAGGACCGGCATCCACTTCACCCCCGATGAACTTGCCCACGGATTTCTTGAACTTCACCGTCAGGGAAAAGTCGGC
GGTCTATTATTAAGTACCGGAATCCCACGCGGGGATGTTGACCTCGGCATGGAAAAACTCACCGAAACGGCAAAAATCAT
CCGTAGTTCGGGATACAATGGCTATCTGCATCTCAAAGTACTTCCCGGGGCAAGCCGTACCGACATCGTTGAGATGGCGA
AATATGCCACCCGGCTCAGCATCAATCTCGAAGCACCCGGTTCTTCTTATCTTTCAGAACTTGCTACCGTCAAAGATTAT
TCCTCTGACCTCCTGACCCGGCACAGATGGCTTGCCGAAATAATGCCTGGTAAACACTCTACCCAGTTTGTTCTCGGGGC
CGCCGGGGAAACCGATGCCGATCTCTTCCAGACGGTCATGACCAGTTATGAAAAGTACAACCCTGCAAGGATCTACTACT
CTGCATTTTACGCAGTAAACGGGACGCCTCTGGAAAATCATGAAAACACAGCTCTCTGGCGGGCAAACAGATGGTATCAG
GTCGACGCTCTTCTCCGACTCTACGGGTACGACAGAGCCGAAACCTCTCCCGTCTTCGATGAACACGGGATGCTCATGAA
TACTGATCCGAAAATACTTCTCGCGAGAAATCTTCCCGAAGTGGATCCGGCAACCGCCGGATATGTCGAACTGCTCCGTG
TGCCTGGAATCGGGCCTGTGTCTGCTGCTTCCATTCTCAAAACCCGCGATTTTCGAAATGTCAAAAATCCGGATATTCTC
CGCGAATGCGGCGTCATCATGAAACGGGCGATGCCGTATCTCTCGCTTGGCCGCACCAAACAAACCACTTTTGCCTCATG
GTACTGA

Upstream 100 bases:

>100_bases
ATGTCCCCACCCACTCATTGAGCATCACGATTTACCACCTAGAGTTGGCATTATCGCACCGCGCGGTTGGGGGTTTATAT
GTCCCTATTCCGATACTTAC

Downstream 100 bases:

>100_bases
TCCAAGCCCCGCAACAAACAAAGCTATTTGTCAATACACGGCGAATAACTTAGTAACTTTTTGAATAACTCATAAGGAGA
AAAGTATGAACAAAACCATC

Product: hypothetical protein

Products: NA

Alternate protein names: Radical SAM Domain Protein; Radical SAM Family Protein; Elongator /MiaB/NifB; Radical Sam Domain Protein; Radical SAM; Radical SAM Superfamily Protein; Biotin Synthase Related Domain-Containing Protein; Biotin Synthase Related Domain Containing Protein; Elongator Protein; Radical SAM Methylase Protein; Helix-Hairpin-Helix Motif; Radical SAM Protein

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MEMSELTRKIELATSSQFFDQTGRNEGKTHQCTPMRILLEGTCSFDCAYCQVCTKRTGIHFTPDELAHGFLELHRQGKVG
GLLLSTGIPRGDVDLGMEKLTETAKIIRSSGYNGYLHLKVLPGASRTDIVEMAKYATRLSINLEAPGSSYLSELATVKDY
SSDLLTRHRWLAEIMPGKHSTQFVLGAAGETDADLFQTVMTSYEKYNPARIYYSAFYAVNGTPLENHENTALWRANRWYQ
VDALLRLYGYDRAETSPVFDEHGMLMNTDPKILLARNLPEVDPATAGYVELLRVPGIGPVSAASILKTRDFRNVKNPDIL
RECGVIMKRAMPYLSLGRTKQTTFASWY

Sequences:

>Translated_348_residues
MEMSELTRKIELATSSQFFDQTGRNEGKTHQCTPMRILLEGTCSFDCAYCQVCTKRTGIHFTPDELAHGFLELHRQGKVG
GLLLSTGIPRGDVDLGMEKLTETAKIIRSSGYNGYLHLKVLPGASRTDIVEMAKYATRLSINLEAPGSSYLSELATVKDY
SSDLLTRHRWLAEIMPGKHSTQFVLGAAGETDADLFQTVMTSYEKYNPARIYYSAFYAVNGTPLENHENTALWRANRWYQ
VDALLRLYGYDRAETSPVFDEHGMLMNTDPKILLARNLPEVDPATAGYVELLRVPGIGPVSAASILKTRDFRNVKNPDIL
RECGVIMKRAMPYLSLGRTKQTTFASWY
>Mature_348_residues
MEMSELTRKIELATSSQFFDQTGRNEGKTHQCTPMRILLEGTCSFDCAYCQVCTKRTGIHFTPDELAHGFLELHRQGKVG
GLLLSTGIPRGDVDLGMEKLTETAKIIRSSGYNGYLHLKVLPGASRTDIVEMAKYATRLSINLEAPGSSYLSELATVKDY
SSDLLTRHRWLAEIMPGKHSTQFVLGAAGETDADLFQTVMTSYEKYNPARIYYSAFYAVNGTPLENHENTALWRANRWYQ
VDALLRLYGYDRAETSPVFDEHGMLMNTDPKILLARNLPEVDPATAGYVELLRVPGIGPVSAASILKTRDFRNVKNPDIL
RECGVIMKRAMPYLSLGRTKQTTFASWY

Specific function: Unknown

COG id: COG4277

COG function: function code R; Predicted DNA-binding protein with the Helix-hairpin-helix motif

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39015; Mature: 39015

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMSELTRKIELATSSQFFDQTGRNEGKTHQCTPMRILLEGTCSFDCAYCQVCTKRTGIH
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCE
FTPDELAHGFLELHRQGKVGGLLLSTGIPRGDVDLGMEKLTETAKIIRSSGYNGYLHLKV
ECHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEE
LPGASRTDIVEMAKYATRLSINLEAPGSSYLSELATVKDYSSDLLTRHRWLAEIMPGKHS
CCCCCHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TQFVLGAAGETDADLFQTVMTSYEKYNPARIYYSAFYAVNGTPLENHENTALWRANRWYQ
CEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCEEEECCCEEE
VDALLRLYGYDRAETSPVFDEHGMLMNTDPKILLARNLPEVDPATAGYVELLRVPGIGPV
HHHHHHHHCCCCCCCCCCCCCCCCEECCCCCEEEECCCCCCCCCCCCHHHHHCCCCCCCH
SAASILKTRDFRNVKNPDILRECGVIMKRAMPYLSLGRTKQTTFASWY
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCCCEECCC
>Mature Secondary Structure
MEMSELTRKIELATSSQFFDQTGRNEGKTHQCTPMRILLEGTCSFDCAYCQVCTKRTGIH
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCE
FTPDELAHGFLELHRQGKVGGLLLSTGIPRGDVDLGMEKLTETAKIIRSSGYNGYLHLKV
ECHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEE
LPGASRTDIVEMAKYATRLSINLEAPGSSYLSELATVKDYSSDLLTRHRWLAEIMPGKHS
CCCCCHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TQFVLGAAGETDADLFQTVMTSYEKYNPARIYYSAFYAVNGTPLENHENTALWRANRWYQ
CEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCEEEECCCEEE
VDALLRLYGYDRAETSPVFDEHGMLMNTDPKILLARNLPEVDPATAGYVELLRVPGIGPV
HHHHHHHHCCCCCCCCCCCCCCCCEECCCCCEEEECCCCCCCCCCCCHHHHHCCCCCCCH
SAASILKTRDFRNVKNPDILRECGVIMKRAMPYLSLGRTKQTTFASWY
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA