Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124485851

Identifier: 124485851

GI number: 124485851

Start: 1040408

End: 1040680

Strand: Reverse

Name: 124485851

Synonym: Mlab_1031

Alternate gene names: NA

Gene position: 1040680-1040408 (Counterclockwise)

Preceding gene: 124485852

Following gene: 124485850

Centisome position: 57.66

GC content: 46.89

Gene sequence:

>273_bases
ATGAACAAAACCATCATCACCGTCGTTGGAAAGGATGCGGTCGGCATCATCGCAAAAGTATGTACCTATTTATCGAATAA
TCATATCAATGTCGAAGATATATCGCAGACAATCGTTCAGGGATACTTCAATATGATGATGATCGTCGACACCAGCAGCT
CTGCGGTGCCGTTCGGCGATATGGCCCGCGATCTTGAACAGATCGGTCAGGAGATCGGTGTCCACATCAGATGTCAGCGC
GAAGAGATATTCGAGAAGATGCACCGCATCTAA

Upstream 100 bases:

>100_bases
GCCTCATGGTACTGATCCAAGCCCCGCAACAAACAAAGCTATTTGTCAATACACGGCGAATAACTTAGTAACTTTTTGAA
TAACTCATAAGGAGAAAAGT

Downstream 100 bases:

>100_bases
GGGGCATCCATGATCAATATCTTCGAGGTAAACGAGACCAATAAAATGATCGAGCAGGAGATGCTCGATGTCAGAACGAT
CACGCTCGGTATCAGCCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MNKTIITVVGKDAVGIIAKVCTYLSNNHINVEDISQTIVQGYFNMMMIVDTSSSAVPFGDMARDLEQIGQEIGVHIRCQR
EEIFEKMHRI

Sequences:

>Translated_90_residues
MNKTIITVVGKDAVGIIAKVCTYLSNNHINVEDISQTIVQGYFNMMMIVDTSSSAVPFGDMARDLEQIGQEIGVHIRCQR
EEIFEKMHRI
>Mature_90_residues
MNKTIITVVGKDAVGIIAKVCTYLSNNHINVEDISQTIVQGYFNMMMIVDTSSSAVPFGDMARDLEQIGQEIGVHIRCQR
EEIFEKMHRI

Specific function: Unknown

COG id: COG3830

COG function: function code T; ACT domain-containing protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ACT domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002912
- InterPro:   IPR022986 [H]

Pfam domain/function: PF01842 ACT [H]

EC number: NA

Molecular weight: Translated: 10144; Mature: 10144

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
8.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
6.7 %Met     (Mature Protein)
8.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKTIITVVGKDAVGIIAKVCTYLSNNHINVEDISQTIVQGYFNMMMIVDTSSSAVPFGD
CCCEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCHH
MARDLEQIGQEIGVHIRCQREEIFEKMHRI
HHHHHHHHHHHCCEEEEECHHHHHHHHHCC
>Mature Secondary Structure
MNKTIITVVGKDAVGIIAKVCTYLSNNHINVEDISQTIVQGYFNMMMIVDTSSSAVPFGD
CCCEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCHH
MARDLEQIGQEIGVHIRCQREEIFEKMHRI
HHHHHHHHHHHCCEEEEECHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12381787 [H]