| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485849
Identifier: 124485849
GI number: 124485849
Start: 1038036
End: 1038800
Strand: Reverse
Name: 124485849
Synonym: Mlab_1029
Alternate gene names: NA
Gene position: 1038800-1038036 (Counterclockwise)
Preceding gene: 124485850
Following gene: 124485848
Centisome position: 57.55
GC content: 47.71
Gene sequence:
>765_bases ATGAATGTGTTAAATTGTACGTGCAGAATCCTTTTCGCGATATTGGTGATCTGCATATTTACCGGCACTGTTGGTGCGGC AACAACAGAAATCACAATTGAAAAATACACGGCAGACGGCAGTCTTCTCAACACGACTACCGTCGATTATCAATGGATGG AGGCAAATCTCCCTGTTGTTGGTGATGGCAATACTCATTATTACCTGCAGGGCCCTGTATTTGAGGGAGATATCTGGGAT CCTACAGAGTCGGTGAATATCAAAGACATGGGTGCTCTCAAAGGGACGTCGGTCAAAGACCTCTGTGATATGGTCGGAGG AGCATCTGCGGGAGATACTATTACTTTTATCGCCTCGGACGGCCTCAAGAAGACCTTCCCGCAGAAGTACATCTACAGTC CGGCTCCGGCTATGGGTATTATTTTCCTTTCCTGGTACAGTAAAGACGAAGGATACGTCCCGGAATATTATACCGGTATG CGGCTTATGTTCACCGGGGACACCAGTCTGAACCCCCAGGGATATCATGTCTTTGGTGTTGCCGATGAAAAAGCGACGAT GGATGAACAGGACTGGTATTACTATTCGGGCAAGTATCCAACGACAACGGGCCTGTCAGTACAGAACGTTGAGACGATCT CTATTATTTCTTCCGTGCCGGCAACGACGCAGCCGACGACTACTGCGACCCAGTCTCCATCTTTTGGTGTTGTGATCTGC GTCTTTGGTATTTTAGGAGCTGTTCTCCTCTTCAGGAAAGTATAA
Upstream 100 bases:
>100_bases AAAATATATATGTTCAAACTATTCATATTGGTCGTTTGTCAATGGGTTTTTGTATCCTCTGCATTCTGTCATGGTGGTTT GGGTTTTGGAGATTAGTTAA
Downstream 100 bases:
>100_bases TATGAAACGGATTGGTATCTTCATTCTGATTCTCCTCCTTCTGGTTCCTGCGGTCTCTGCCGCGGAACTTCCGAGATGGG GGCCGTACATCACTTCACTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MNVLNCTCRILFAILVICIFTGTVGAATTEITIEKYTADGSLLNTTTVDYQWMEANLPVVGDGNTHYYLQGPVFEGDIWD PTESVNIKDMGALKGTSVKDLCDMVGGASAGDTITFIASDGLKKTFPQKYIYSPAPAMGIIFLSWYSKDEGYVPEYYTGM RLMFTGDTSLNPQGYHVFGVADEKATMDEQDWYYYSGKYPTTTGLSVQNVETISIISSVPATTQPTTTATQSPSFGVVIC VFGILGAVLLFRKV
Sequences:
>Translated_254_residues MNVLNCTCRILFAILVICIFTGTVGAATTEITIEKYTADGSLLNTTTVDYQWMEANLPVVGDGNTHYYLQGPVFEGDIWD PTESVNIKDMGALKGTSVKDLCDMVGGASAGDTITFIASDGLKKTFPQKYIYSPAPAMGIIFLSWYSKDEGYVPEYYTGM RLMFTGDTSLNPQGYHVFGVADEKATMDEQDWYYYSGKYPTTTGLSVQNVETISIISSVPATTQPTTTATQSPSFGVVIC VFGILGAVLLFRKV >Mature_254_residues MNVLNCTCRILFAILVICIFTGTVGAATTEITIEKYTADGSLLNTTTVDYQWMEANLPVVGDGNTHYYLQGPVFEGDIWD PTESVNIKDMGALKGTSVKDLCDMVGGASAGDTITFIASDGLKKTFPQKYIYSPAPAMGIIFLSWYSKDEGYVPEYYTGM RLMFTGDTSLNPQGYHVFGVADEKATMDEQDWYYYSGKYPTTTGLSVQNVETISIISSVPATTQPTTTATQSPSFGVVIC VFGILGAVLLFRKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27644; Mature: 27644
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVLNCTCRILFAILVICIFTGTVGAATTEITIEKYTADGSLLNTTTVDYQWMEANLPVV CCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCEEEEEEEEEEEEECCCCEE GDGNTHYYLQGPVFEGDIWDPTESVNIKDMGALKGTSVKDLCDMVGGASAGDTITFIASD ECCCEEEEEECCEECCCCCCCCCCCCCEECCCCCCCCHHHHHHHHCCCCCCCEEEEEECC GLKKTFPQKYIYSPAPAMGIIFLSWYSKDEGYVPEYYTGMRLMFTGDTSLNPQGYHVFGV CCHHHCCHHHCCCCCCCEEEEEEEEECCCCCCCCCHHCCEEEEEECCCCCCCCCEEEEEE ADEKATMDEQDWYYYSGKYPTTTGLSVQNVETISIISSVPATTQPTTTATQSPSFGVVIC CCCCCCCCCCCEEEECCCCCCCCCCEECCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHH VFGILGAVLLFRKV HHHHHHHHHHHHCC >Mature Secondary Structure MNVLNCTCRILFAILVICIFTGTVGAATTEITIEKYTADGSLLNTTTVDYQWMEANLPVV CCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCEEEEEEEEEEEEECCCCEE GDGNTHYYLQGPVFEGDIWDPTESVNIKDMGALKGTSVKDLCDMVGGASAGDTITFIASD ECCCEEEEEECCEECCCCCCCCCCCCCEECCCCCCCCHHHHHHHHCCCCCCCEEEEEECC GLKKTFPQKYIYSPAPAMGIIFLSWYSKDEGYVPEYYTGMRLMFTGDTSLNPQGYHVFGV CCHHHCCHHHCCCCCCCEEEEEEEEECCCCCCCCCHHCCEEEEEECCCCCCCCCEEEEEE ADEKATMDEQDWYYYSGKYPTTTGLSVQNVETISIISSVPATTQPTTTATQSPSFGVVIC CCCCCCCCCCCEEEECCCCCCCCCCEECCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHH VFGILGAVLLFRKV HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA