| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485848
Identifier: 124485848
GI number: 124485848
Start: 1036850
End: 1038034
Strand: Reverse
Name: 124485848
Synonym: Mlab_1028
Alternate gene names: NA
Gene position: 1038034-1036850 (Counterclockwise)
Preceding gene: 124485849
Following gene: 124485847
Centisome position: 57.51
GC content: 49.79
Gene sequence:
>1185_bases ATGAAACGGATTGGTATCTTCATTCTGATTCTCCTCCTTCTGGTTCCTGCGGTCTCTGCCGCGGAACTTCCGAGATGGGG GCCGTACATCACTTCACTGGACGAGGATACCGTAACGATTCATTACTGCCTGTATGAAAATGCGTCCGGCGCAGCGGAGA TTACTCAGGGAAACATGATCTCCCTCTTCACATCAGATTCGGCGGCGTTCCATCATTTACAGATTAATAATCTGACCCCT GATACAACCTACTCGTACAGGATTCTTGTGAACGGCACTTGGTCAGATACCTATTCGTTTCGAACGTTCGGTGTAGAAAA CTACACCTTTGTGGTGTCAGGGGATACCCGAAGCGAGCCGCCGTTCACCCAGATCGAACGTCACGGTGTTGTAGCCTCCG CGATCCTCGAAGAGAACCCCTTGTTTGTAGTACATCTTGGGGACTTCTCCGGCGAAGCGAACGATCCAGAGGAGTGGGAC CAGTTTTTTTCTGCGGGACACGATCTGTATGCAAATACGATCATCATCCCGGTCCAGGGAAATCATGATTACTCTCCACT CTATACCGAGATATTCGCTATGCCTGACTGGTATGCGTTTTCAGCTGGCTCTCTGCAATTCCTTGTCTTAAATACGAACG GCTGGACCCAGACCAGATTCGATGATCAGACTGCCTGGCTCTCAGAAAAAGTTGCGGAGAAAGGCGTGAAAATAGTTTTC TTCCATCATCCATTCTACACAACGGATCAGAAACGCACCGGGCTGACCCTTGATCAGATTCCAATCTGGCAGGAGATCTT TGAGACAGGGGGTGTCTCTGCGGTCTACTCAGCCCATATGCATGCATATGAGCGGTATGTATCCAATGGGGTCACGTACG TAACGAATGGTGCCGGAGGTGCGCCGCTTTATGCTCCGTCTGTGGATCCAGCAGATGAACTTGTGACCGCAATTTACCAC ACGCTTGGATACGTCCGTGTTGATGTAACGGGATCTGAGTTCACGTCTACCTTTTTCAAGGTCGCTGAGGCGTCCGATGA TAACAGCGTCTTGAAAAAAATCTACCCAAGTGGAACGGTCGGCGACCAGTTTGGAACTGGTACTTCGGCATCTTCGCCTT TTGGAAACTGTGCTCTTCTTGGTCTTCTATGCGGAGCCGTCTATTTTATTCGGAGAAATCCATGA
Upstream 100 bases:
>100_bases ACGCAGCCGACGACTACTGCGACCCAGTCTCCATCTTTTGGTGTTGTGATCTGCGTCTTTGGTATTTTAGGAGCTGTTCT CCTCTTCAGGAAAGTATAAT
Downstream 100 bases:
>100_bases AAATCAGAATAATTCTACTAACCCTGTTTGTTGTCTTCTGTCTCGTATCAGTTGCATCGGCAGGTCCTTCGGGTGCCACT ACCGAGCTGCACCTGCTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Alkaline Phosphatase; Ser/Thr Protein Phosphatase Family Protein; Metallophosphoesterase/Pkd Domain Protein; Membrane-Associated Protein; N-Acetylmuramoyl-L-Alanine Amidase; Phosphoesterase
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MKRIGIFILILLLLVPAVSAAELPRWGPYITSLDEDTVTIHYCLYENASGAAEITQGNMISLFTSDSAAFHHLQINNLTP DTTYSYRILVNGTWSDTYSFRTFGVENYTFVVSGDTRSEPPFTQIERHGVVASAILEENPLFVVHLGDFSGEANDPEEWD QFFSAGHDLYANTIIIPVQGNHDYSPLYTEIFAMPDWYAFSAGSLQFLVLNTNGWTQTRFDDQTAWLSEKVAEKGVKIVF FHHPFYTTDQKRTGLTLDQIPIWQEIFETGGVSAVYSAHMHAYERYVSNGVTYVTNGAGGAPLYAPSVDPADELVTAIYH TLGYVRVDVTGSEFTSTFFKVAEASDDNSVLKKIYPSGTVGDQFGTGTSASSPFGNCALLGLLCGAVYFIRRNP
Sequences:
>Translated_394_residues MKRIGIFILILLLLVPAVSAAELPRWGPYITSLDEDTVTIHYCLYENASGAAEITQGNMISLFTSDSAAFHHLQINNLTP DTTYSYRILVNGTWSDTYSFRTFGVENYTFVVSGDTRSEPPFTQIERHGVVASAILEENPLFVVHLGDFSGEANDPEEWD QFFSAGHDLYANTIIIPVQGNHDYSPLYTEIFAMPDWYAFSAGSLQFLVLNTNGWTQTRFDDQTAWLSEKVAEKGVKIVF FHHPFYTTDQKRTGLTLDQIPIWQEIFETGGVSAVYSAHMHAYERYVSNGVTYVTNGAGGAPLYAPSVDPADELVTAIYH TLGYVRVDVTGSEFTSTFFKVAEASDDNSVLKKIYPSGTVGDQFGTGTSASSPFGNCALLGLLCGAVYFIRRNP >Mature_394_residues MKRIGIFILILLLLVPAVSAAELPRWGPYITSLDEDTVTIHYCLYENASGAAEITQGNMISLFTSDSAAFHHLQINNLTP DTTYSYRILVNGTWSDTYSFRTFGVENYTFVVSGDTRSEPPFTQIERHGVVASAILEENPLFVVHLGDFSGEANDPEEWD QFFSAGHDLYANTIIIPVQGNHDYSPLYTEIFAMPDWYAFSAGSLQFLVLNTNGWTQTRFDDQTAWLSEKVAEKGVKIVF FHHPFYTTDQKRTGLTLDQIPIWQEIFETGGVSAVYSAHMHAYERYVSNGVTYVTNGAGGAPLYAPSVDPADELVTAIYH TLGYVRVDVTGSEFTSTFFKVAEASDDNSVLKKIYPSGTVGDQFGTGTSASSPFGNCALLGLLCGAVYFIRRNP
Specific function: Unknown
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43581; Mature: 43581
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIGIFILILLLLVPAVSAAELPRWGPYITSLDEDTVTIHYCLYENASGAAEITQGNMI CCCHHHHHHHHHHHHCCCCHHCCCCCCCEEECCCCCEEEEEEEEEECCCCCEEECCCCEE SLFTSDSAAFHHLQINNLTPDTTYSYRILVNGTWSDTYSFRTFGVENYTFVVSGDTRSEP EEEECCCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCEEEEECCCCEEEEEECCCCCCC PFTQIERHGVVASAILEENPLFVVHLGDFSGEANDPEEWDQFFSAGHDLYANTIIIPVQG CHHHHHHCCCCEEHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCEEECEEEEEEEC NHDYSPLYTEIFAMPDWYAFSAGSLQFLVLNTNGWTQTRFDDQTAWLSEKVAEKGVKIVF CCCCCCHHHHHHCCCCCEEECCCCEEEEEEECCCCEECCCCCHHHHHHHHHHHCCCEEEE FHHPFYTTDQKRTGLTLDQIPIWQEIFETGGVSAVYSAHMHAYERYVSNGVTYVTNGAGG EECCEECCCCCCCCCCHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCC APLYAPSVDPADELVTAIYHTLGYVRVDVTGSEFTSTFFKVAEASDDNSVLKKIYPSGTV CCEECCCCCCHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHCCCCCC GDQFGTGTSASSPFGNCALLGLLCGAVYFIRRNP CCCCCCCCCCCCCCCHHHHHHHHHHHEEEEECCC >Mature Secondary Structure MKRIGIFILILLLLVPAVSAAELPRWGPYITSLDEDTVTIHYCLYENASGAAEITQGNMI CCCHHHHHHHHHHHHCCCCHHCCCCCCCEEECCCCCEEEEEEEEEECCCCCEEECCCCEE SLFTSDSAAFHHLQINNLTPDTTYSYRILVNGTWSDTYSFRTFGVENYTFVVSGDTRSEP EEEECCCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCEEEEECCCCEEEEEECCCCCCC PFTQIERHGVVASAILEENPLFVVHLGDFSGEANDPEEWDQFFSAGHDLYANTIIIPVQG CHHHHHHCCCCEEHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCEEECEEEEEEEC NHDYSPLYTEIFAMPDWYAFSAGSLQFLVLNTNGWTQTRFDDQTAWLSEKVAEKGVKIVF CCCCCCHHHHHHCCCCCEEECCCCEEEEEEECCCCEECCCCCHHHHHHHHHHHCCCEEEE FHHPFYTTDQKRTGLTLDQIPIWQEIFETGGVSAVYSAHMHAYERYVSNGVTYVTNGAGG EECCEECCCCCCCCCCHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCC APLYAPSVDPADELVTAIYHTLGYVRVDVTGSEFTSTFFKVAEASDDNSVLKKIYPSGTV CCEECCCCCCHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHCCCCCC GDQFGTGTSASSPFGNCALLGLLCGAVYFIRRNP CCCCCCCCCCCCCCCHHHHHHHHHHHEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA