Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124485798

Identifier: 124485798

GI number: 124485798

Start: 974672

End: 975409

Strand: Reverse

Name: 124485798

Synonym: Mlab_0977

Alternate gene names: NA

Gene position: 975409-974672 (Counterclockwise)

Preceding gene: 124485799

Following gene: 124485797

Centisome position: 54.04

GC content: 55.15

Gene sequence:

>738_bases
ATGGCTGCGACCCTCTCCCTCGCATTTTTCGACAGTCCGGTCTGGAACAACCTGGCCCTGATCCTCGGCCAGCTTCTTCT
GATCTTCATAGCCTTCTGGCTGATCTTCTCCATTCTGATGGCGATCTTAATCGTCATCTCGATCCACCGGAAACAGATGT
ACTTCCCGCGGCTTCTCAGACCGTTCTTTACGATCATGGAAGGCACGGTCAAGATCGTCTGTCTCCTCCTCGGCGTCGAC
GGAAAAGAGCTGATGGAGTTTCTGATCAGAATCGACAACGAGATGAACTACTCCAACTTCGCGAAAACCCCGGTCGAAGA
CCGTGTCGTCTTCTTTCCCCAGTGTCTCCGTGCTCACGATTGCCCGGCCCGTCTGACCCCCGACGGACTCAAATGCGTTT
CCTGCGGGCGCTGCGGGCTTGGACGGGCGGTCCCTGCTCTCAACGAAGCAGGATACAAGACCTTCATCATCCCGGGCTCG
ACCTTCATTAAAAGGATGGTGAAAAAATATAAGCCGAAGGCAATGATCGGCGTCGGCTGCATGATGGAGGTCAAGGAAGG
TCTGCAGATGGGCCGAAAGATCTCCATGACGACGATCGGATTCGTTACCAAGACGGACGGATGCGTGGAAACGACCATGG
ACTACGAAGAGCTCATGGAAGTTGCCTCCCTCGGGCTTGCCCACCCCGTGGTCATGAAGCCCGAGACCGGCGACAAACTC
CCCGGTTCTAAAACATAA

Upstream 100 bases:

>100_bases
CAACTACGCCTTCGACGCGACGCCGCTGGATCTAGTTACCGCCATTATAACCGAAAAGGGTGTCCTGTATCCCCCGTATG
ATTTCCAGGACATGAAATAA

Downstream 100 bases:

>100_bases
TAACCCCCTGCCGCAAACATGTACCCCGCATGAAAAACCTGATCGTGAAGGGTGCCAGACAGCACAACCTTCAGAATATC
AATATAGAACTCCCGCGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MAATLSLAFFDSPVWNNLALILGQLLLIFIAFWLIFSILMAILIVISIHRKQMYFPRLLRPFFTIMEGTVKIVCLLLGVD
GKELMEFLIRIDNEMNYSNFAKTPVEDRVVFFPQCLRAHDCPARLTPDGLKCVSCGRCGLGRAVPALNEAGYKTFIIPGS
TFIKRMVKKYKPKAMIGVGCMMEVKEGLQMGRKISMTTIGFVTKTDGCVETTMDYEELMEVASLGLAHPVVMKPETGDKL
PGSKT

Sequences:

>Translated_245_residues
MAATLSLAFFDSPVWNNLALILGQLLLIFIAFWLIFSILMAILIVISIHRKQMYFPRLLRPFFTIMEGTVKIVCLLLGVD
GKELMEFLIRIDNEMNYSNFAKTPVEDRVVFFPQCLRAHDCPARLTPDGLKCVSCGRCGLGRAVPALNEAGYKTFIIPGS
TFIKRMVKKYKPKAMIGVGCMMEVKEGLQMGRKISMTTIGFVTKTDGCVETTMDYEELMEVASLGLAHPVVMKPETGDKL
PGSKT
>Mature_244_residues
AATLSLAFFDSPVWNNLALILGQLLLIFIAFWLIFSILMAILIVISIHRKQMYFPRLLRPFFTIMEGTVKIVCLLLGVDG
KELMEFLIRIDNEMNYSNFAKTPVEDRVVFFPQCLRAHDCPARLTPDGLKCVSCGRCGLGRAVPALNEAGYKTFIIPGST
FIKRMVKKYKPKAMIGVGCMMEVKEGLQMGRKISMTTIGFVTKTDGCVETTMDYEELMEVASLGLAHPVVMKPETGDKLP
GSKT

Specific function: Unknown

COG id: COG1852

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002829
- InterPro:   IPR017446 [H]

Pfam domain/function: PF01976 DUF116 [H]

EC number: NA

Molecular weight: Translated: 27330; Mature: 27199

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
9.4 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
9.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAATLSLAFFDSPVWNNLALILGQLLLIFIAFWLIFSILMAILIVISIHRKQMYFPRLLR
CCCEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PFFTIMEGTVKIVCLLLGVDGKELMEFLIRIDNEMNYSNFAKTPVEDRVVFFPQCLRAHD
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCEEHHHHHHCCCC
CPARLTPDGLKCVSCGRCGLGRAVPALNEAGYKTFIIPGSTFIKRMVKKYKPKAMIGVGC
CCCCCCCCCCCEECCCCCCCCCCCCCHHCCCCEEEEECCHHHHHHHHHHHCCCHHHHHHH
MMEVKEGLQMGRKISMTTIGFVTKTDGCVETTMDYEELMEVASLGLAHPVVMKPETGDKL
HHHHHHHHHHCCEEEHHEEEEEECCCCHHHHHCCHHHHHHHHHHCCCCCEEECCCCCCCC
PGSKT
CCCCC
>Mature Secondary Structure 
AATLSLAFFDSPVWNNLALILGQLLLIFIAFWLIFSILMAILIVISIHRKQMYFPRLLR
CCEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PFFTIMEGTVKIVCLLLGVDGKELMEFLIRIDNEMNYSNFAKTPVEDRVVFFPQCLRAHD
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCEEHHHHHHCCCC
CPARLTPDGLKCVSCGRCGLGRAVPALNEAGYKTFIIPGSTFIKRMVKKYKPKAMIGVGC
CCCCCCCCCCCEECCCCCCCCCCCCCHHCCCCEEEEECCHHHHHHHHHHHCCCHHHHHHH
MMEVKEGLQMGRKISMTTIGFVTKTDGCVETTMDYEELMEVASLGLAHPVVMKPETGDKL
HHHHHHHHHHCCEEEHHEEEEEECCCCHHHHHCCHHHHHHHHHHCCCCCEEECCCCCCCC
PGSKT
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]