| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485751
Identifier: 124485751
GI number: 124485751
Start: 925177
End: 928056
Strand: Reverse
Name: 124485751
Synonym: Mlab_0929
Alternate gene names: NA
Gene position: 928056-925177 (Counterclockwise)
Preceding gene: 124485757
Following gene: 124485749
Centisome position: 51.42
GC content: 34.97
Gene sequence:
>2880_bases ATGCCGATCCCGCTTCATATGCTGGATGTCCTCTGGATTATGAAGGTTGGAGCATACCTTGATGAGGAACTAGGTGATTG TTGTTTTGGAAATCGTGTTCATGAAAATCTTTGTGAAAGAAAAAACAAAGATACGAGCAGTCATCTGATGAAAATTTATG GCAAACAATATGCCTTTTGGCAAAATAAGGCATTAGATTTTGCAAATAAAGCTATAGAAAATAATGAAATAGTAGATATT CTTACCCTTGATTTCAAGCAATTCTATTATCATATTGAAGGTGATTTTGGGGAGATTGAGGCACATATCACCAAAAAATC AGAAGAAGCAACTTTCAAAGGCAATTTACAAACAAACTTGTTTTTAACTAACATCCTGTTACGGATTCATGAGAAATACT TCGAGATAGTTAAGAATTATATCTCAGTTACAAACCGTACTATTAAAGACAGAGAAATAAATAAATTTCTGCCAATAGGT CTATTTTCATCGGGAATTTTAGCTAATTGGCATCTCAAAGAATTTGATAAGGCAGTAATAAAGGATGTCTCTCCAAGATA TTACGGGAGATATGTTGATGATTGTATTTTCGTATTTGCCCGAACGCAATATAACACAAAAGATAAAGTAAATGATAATG ATTCACCTTCAAAAGAGGAAATAATCAAAAAATATCTTGTAGATAGCGGACTTATATCCGAACCAAAAACGCGAGATGTA CAACTTACATTAAATTATAAAATTTCTGAAATTAGCGGTGATAAAGAATACAGATTAAATGATAGCAGATTTACAAATTC ACGCATTGCGGTCCAAAATAACAAAGTAATGCTTTATCATGTAGATCCAAACCACTCTACGGCAATATTGAGATTATTTA AGAAAAAAATTAAAGAAAATGTTAGTGTGTTTCAATATTTGCCGGAAGAGTCAATTATTGACACACAAGACACAGGAATG CATCAATTAGTGTTTTCTGATGGTTCAACAAACAAACTGCGTAATCTACAGAAATTAGTGATTGACGATTCGAAACTAGC CATTGTTCTCTCAAAACAGATATCACATATCTCTCTGTGCAGCAAACCGATTGAAAAAATAGGGGCACTCACAAAAAACA TGTTCAATGATTTGCGGGGAAATAACTATCTCACCTATATGCGTGTATGGGAAAAGATGTTTAGTATCTTGTTGTTTTCC AAAAAACAAGAGCAGGAGGATGAATTATTTGCCGTGAGTGGTGAACTTTTAGAGCACATTGCCCATCTTAAACCATCAAG TGATTTCAATCCTGTGAATAAGGACGGAAAGGAGGAAATAAATAAAAGTGAAAAAATGATCTTGGATGAATTGTCCAATA ACATTCAGGATACTTTACAAAAATATCTTCTATACTCTATGTTTCAACCTCTCGCCCTCTTTGACGGGGATAGTCGGGAT AAATTTGCGAAGAAAATATCTTCAATTCTGAAAAAATATCTCCAATCAACTCATAACGAATTCTCCGAAGCTCTCATTAT AAAATATATCATTGATTCATTTCGTGCCACGAATCTTTTTCCGCAACATTATGTGATATATCCACTACTCAACTATCTGG AAAATTATGATGGAGATTTATTTGATGTTGATGTATTCAATACGGATTCTTTAAACTTTTTAGAATTGGATAATCAAAAG CTGGATACAACTCCACGATTTATTCATCTTTACGAATATCAACTATTTTTTGCTTTGAAAAATCTCAAGAGTGAAAACCA TCTTACTGAGTGTTCAAAGAGCACGTGTTCTACTAGTGATAGTCCATTATGTTGTTATTTGCAGAAAGCAAATTCTATTT TTGGCAAAAGGACGTATAATAATTGGGGCTCACAATATGATTCTCATGTTACGGTAACCCCATATCTCTGTATGGAATAT GGGGAAAACCCCAATCCAGTCCATCCAACAAAAATAACGATATATTCTGATGACAAACCTCTGAAAAAAATTCGGGTTGG TCTTGTAAATCTTCGGATTACTGAGAAAAACTTGAGACAAAGTTTTGAACCATTGGAAATGCCCCCAAACATTTCTCTAG AGCGCTGGTTGTTAATCTCTCAGGCATTAAATTCGGCGGTCAAAGACAAATGTGATCTGGTGATATTCCCAGAATGTTCC ATTCCAAATCGTTGGTTACCAAAATTGACGCATTGGTCAAAACAACATCAAATTGGGCTAGTATTTGGTCTTGAATATAT CTATAATACAAAAAGCCCGGATACTTCACCATCGAACAATACCGGCAGTGAAAAATGTATCGCTTTCAATCTGACAACCG CTCTCCTTCCATTCCAGATAAATGATAAATATAAATCCTGTTGCGTATCCCTTAGAATCAAAAATCATTACGGTCCACAG GAAGAAAAAGAACTCAATATGTGTGGTTATTCTCTTCCGGATTTGGGAACCTCTACATATCATCTTTACAATTGGAGAGG GAATCAGTTTACAATCTATAATTGCTTTGAGCTTGCAGACATTCAGCACCGAGCTATATTTCGCTCCGAGTTAGACTTCC TGATTGCTTGTTCTGTGAATCGTGACGTGAATTATTTTATGGATATTCTTGAATCCGTTGTACGGGATATCCATTGTTAT GTGATTTATTCAAACACGTCTGAATACGGATGTTCTAGGATCATTCAACCAAAGAAACACGAAGAAAGAAATATTGGTCA AATCGGAGGTGGTACAAACTGTACGCTTCTTGCAGGTGATTTGGATATTGATGCATTACGTAAATTCCAGTCCCATCAAT ATGATGAGACAGATAATAGCTTCAAACCTTTACCCCCCGGTTTCGATATTAAGAAGGTCATTGAACGTAGTGTTGAGTGA
Upstream 100 bases:
>100_bases AGAAGCAATAAAGAATGCTGAGAATACCGAGATTTATGGACTCTCAAATGTAGTTTCTTCTGAAATTTATTACTGGCATG GTCTTAATTATTATATTGAC
Downstream 100 bases:
>100_bases GAGTGAAAATCATACTCTCTCAATTTTGGAAATGTCTTGATTATATTTCTTAATTAGATCCGGGAGTTTACCCTCTGGAT TGCCAGTTATCTCCTGTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 959; Mature: 958
Protein sequence:
>959_residues MPIPLHMLDVLWIMKVGAYLDEELGDCCFGNRVHENLCERKNKDTSSHLMKIYGKQYAFWQNKALDFANKAIENNEIVDI LTLDFKQFYYHIEGDFGEIEAHITKKSEEATFKGNLQTNLFLTNILLRIHEKYFEIVKNYISVTNRTIKDREINKFLPIG LFSSGILANWHLKEFDKAVIKDVSPRYYGRYVDDCIFVFARTQYNTKDKVNDNDSPSKEEIIKKYLVDSGLISEPKTRDV QLTLNYKISEISGDKEYRLNDSRFTNSRIAVQNNKVMLYHVDPNHSTAILRLFKKKIKENVSVFQYLPEESIIDTQDTGM HQLVFSDGSTNKLRNLQKLVIDDSKLAIVLSKQISHISLCSKPIEKIGALTKNMFNDLRGNNYLTYMRVWEKMFSILLFS KKQEQEDELFAVSGELLEHIAHLKPSSDFNPVNKDGKEEINKSEKMILDELSNNIQDTLQKYLLYSMFQPLALFDGDSRD KFAKKISSILKKYLQSTHNEFSEALIIKYIIDSFRATNLFPQHYVIYPLLNYLENYDGDLFDVDVFNTDSLNFLELDNQK LDTTPRFIHLYEYQLFFALKNLKSENHLTECSKSTCSTSDSPLCCYLQKANSIFGKRTYNNWGSQYDSHVTVTPYLCMEY GENPNPVHPTKITIYSDDKPLKKIRVGLVNLRITEKNLRQSFEPLEMPPNISLERWLLISQALNSAVKDKCDLVIFPECS IPNRWLPKLTHWSKQHQIGLVFGLEYIYNTKSPDTSPSNNTGSEKCIAFNLTTALLPFQINDKYKSCCVSLRIKNHYGPQ EEKELNMCGYSLPDLGTSTYHLYNWRGNQFTIYNCFELADIQHRAIFRSELDFLIACSVNRDVNYFMDILESVVRDIHCY VIYSNTSEYGCSRIIQPKKHEERNIGQIGGGTNCTLLAGDLDIDALRKFQSHQYDETDNSFKPLPPGFDIKKVIERSVE
Sequences:
>Translated_959_residues MPIPLHMLDVLWIMKVGAYLDEELGDCCFGNRVHENLCERKNKDTSSHLMKIYGKQYAFWQNKALDFANKAIENNEIVDI LTLDFKQFYYHIEGDFGEIEAHITKKSEEATFKGNLQTNLFLTNILLRIHEKYFEIVKNYISVTNRTIKDREINKFLPIG LFSSGILANWHLKEFDKAVIKDVSPRYYGRYVDDCIFVFARTQYNTKDKVNDNDSPSKEEIIKKYLVDSGLISEPKTRDV QLTLNYKISEISGDKEYRLNDSRFTNSRIAVQNNKVMLYHVDPNHSTAILRLFKKKIKENVSVFQYLPEESIIDTQDTGM HQLVFSDGSTNKLRNLQKLVIDDSKLAIVLSKQISHISLCSKPIEKIGALTKNMFNDLRGNNYLTYMRVWEKMFSILLFS KKQEQEDELFAVSGELLEHIAHLKPSSDFNPVNKDGKEEINKSEKMILDELSNNIQDTLQKYLLYSMFQPLALFDGDSRD KFAKKISSILKKYLQSTHNEFSEALIIKYIIDSFRATNLFPQHYVIYPLLNYLENYDGDLFDVDVFNTDSLNFLELDNQK LDTTPRFIHLYEYQLFFALKNLKSENHLTECSKSTCSTSDSPLCCYLQKANSIFGKRTYNNWGSQYDSHVTVTPYLCMEY GENPNPVHPTKITIYSDDKPLKKIRVGLVNLRITEKNLRQSFEPLEMPPNISLERWLLISQALNSAVKDKCDLVIFPECS IPNRWLPKLTHWSKQHQIGLVFGLEYIYNTKSPDTSPSNNTGSEKCIAFNLTTALLPFQINDKYKSCCVSLRIKNHYGPQ EEKELNMCGYSLPDLGTSTYHLYNWRGNQFTIYNCFELADIQHRAIFRSELDFLIACSVNRDVNYFMDILESVVRDIHCY VIYSNTSEYGCSRIIQPKKHEERNIGQIGGGTNCTLLAGDLDIDALRKFQSHQYDETDNSFKPLPPGFDIKKVIERSVE >Mature_958_residues PIPLHMLDVLWIMKVGAYLDEELGDCCFGNRVHENLCERKNKDTSSHLMKIYGKQYAFWQNKALDFANKAIENNEIVDIL TLDFKQFYYHIEGDFGEIEAHITKKSEEATFKGNLQTNLFLTNILLRIHEKYFEIVKNYISVTNRTIKDREINKFLPIGL FSSGILANWHLKEFDKAVIKDVSPRYYGRYVDDCIFVFARTQYNTKDKVNDNDSPSKEEIIKKYLVDSGLISEPKTRDVQ LTLNYKISEISGDKEYRLNDSRFTNSRIAVQNNKVMLYHVDPNHSTAILRLFKKKIKENVSVFQYLPEESIIDTQDTGMH QLVFSDGSTNKLRNLQKLVIDDSKLAIVLSKQISHISLCSKPIEKIGALTKNMFNDLRGNNYLTYMRVWEKMFSILLFSK KQEQEDELFAVSGELLEHIAHLKPSSDFNPVNKDGKEEINKSEKMILDELSNNIQDTLQKYLLYSMFQPLALFDGDSRDK FAKKISSILKKYLQSTHNEFSEALIIKYIIDSFRATNLFPQHYVIYPLLNYLENYDGDLFDVDVFNTDSLNFLELDNQKL DTTPRFIHLYEYQLFFALKNLKSENHLTECSKSTCSTSDSPLCCYLQKANSIFGKRTYNNWGSQYDSHVTVTPYLCMEYG ENPNPVHPTKITIYSDDKPLKKIRVGLVNLRITEKNLRQSFEPLEMPPNISLERWLLISQALNSAVKDKCDLVIFPECSI PNRWLPKLTHWSKQHQIGLVFGLEYIYNTKSPDTSPSNNTGSEKCIAFNLTTALLPFQINDKYKSCCVSLRIKNHYGPQE EKELNMCGYSLPDLGTSTYHLYNWRGNQFTIYNCFELADIQHRAIFRSELDFLIACSVNRDVNYFMDILESVVRDIHCYV IYSNTSEYGCSRIIQPKKHEERNIGQIGGGTNCTLLAGDLDIDALRKFQSHQYDETDNSFKPLPPGFDIKKVIERSVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 111242; Mature: 111111
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: PS00318 HMG_COA_REDUCTASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIPLHMLDVLWIMKVGAYLDEELGDCCFGNRVHENLCERKNKDTSSHLMKIYGKQYAFW CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCHHHHH QNKALDFANKAIENNEIVDILTLDFKQFYYHIEGDFGEIEAHITKKSEEATFKGNLQTNL HHHHHHHHHHHCCCCCEEEEEEEEHHHEEEEECCCCCEEEEEEECCCCCCEEECCCCHHH FLTNILLRIHEKYFEIVKNYISVTNRTIKDREINKFLPIGLFSSGILANWHLKEFDKAVI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCEECCCHHHHHHHHH KDVSPRYYGRYVDDCIFVFARTQYNTKDKVNDNDSPSKEEIIKKYLVDSGLISEPKTRDV HHCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEE QLTLNYKISEISGDKEYRLNDSRFTNSRIAVQNNKVMLYHVDPNHSTAILRLFKKKIKEN EEEEEEEEEECCCCCCEECCCCCCCCCEEEEECCEEEEEEECCCCCHHHHHHHHHHHHCC VSVFQYLPEESIIDTQDTGMHQLVFSDGSTNKLRNLQKLVIDDSKLAIVLSKQISHISLC HHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEHHHHHHHHH SKPIEKIGALTKNMFNDLRGNNYLTYMRVWEKMFSILLFSKKQEQEDELFAVSGELLEHI HHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH AHLKPSSDFNPVNKDGKEEINKSEKMILDELSNNIQDTLQKYLLYSMFQPLALFDGDSRD HHCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHH KFAKKISSILKKYLQSTHNEFSEALIIKYIIDSFRATNLFPQHYVIYPLLNYLENYDGDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCE FDVDVFNTDSLNFLELDNQKLDTTPRFIHLYEYQLFFALKNLKSENHLTECSKSTCSTSD EEEEEECCCCCEEEEECCCCCCCCCCEEEEHHHHHHHHHHHCCCCCHHHHHHHHCCCCCC SPLCCYLQKANSIFGKRTYNNWGSQYDSHVTVTPYLCMEYGENPNPVHPTKITIYSDDKP CCEEEEEEHHHHHHCCCCCCCCCCCCCCEEEECHHHHHHCCCCCCCCCCEEEEEECCCCH LKKIRVGLVNLRITEKNLRQSFEPLEMPPNISLERWLLISQALNSAVKDKCDLVIFPECS HHHHHEEHEEEEEEHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCC IPNRWLPKLTHWSKQHQIGLVFGLEYIYNTKSPDTSPSNNTGSEKCIAFNLTTALLPFQI CCCCCCHHHHCCCCCCCEEEEEEEHHHCCCCCCCCCCCCCCCCCCEEEEEEHHEEEEEEE NDKYKSCCVSLRIKNHYGPQEEKELNMCGYSLPDLGTSTYHLYNWRGNQFTIYNCFELAD CCHHHCEEEEEEEECCCCCCCHHHHHHCCCCCCCCCCCEEEEEEEECCEEEEEEEHHHHH IQHRAIFRSELDFLIACSVNRDVNYFMDILESVVRDIHCYVIYSNTSEYGCSRIIQPKKH HHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCEEEEEEECCCCCHHHHHCCCCCCC EERNIGQIGGGTNCTLLAGDLDIDALRKFQSHQYDETDNSFKPLPPGFDIKKVIERSVE CCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCC >Mature Secondary Structure PIPLHMLDVLWIMKVGAYLDEELGDCCFGNRVHENLCERKNKDTSSHLMKIYGKQYAFW CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCHHHHH QNKALDFANKAIENNEIVDILTLDFKQFYYHIEGDFGEIEAHITKKSEEATFKGNLQTNL HHHHHHHHHHHCCCCCEEEEEEEEHHHEEEEECCCCCEEEEEEECCCCCCEEECCCCHHH FLTNILLRIHEKYFEIVKNYISVTNRTIKDREINKFLPIGLFSSGILANWHLKEFDKAVI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCEECCCHHHHHHHHH KDVSPRYYGRYVDDCIFVFARTQYNTKDKVNDNDSPSKEEIIKKYLVDSGLISEPKTRDV HHCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEE QLTLNYKISEISGDKEYRLNDSRFTNSRIAVQNNKVMLYHVDPNHSTAILRLFKKKIKEN EEEEEEEEEECCCCCCEECCCCCCCCCEEEEECCEEEEEEECCCCCHHHHHHHHHHHHCC VSVFQYLPEESIIDTQDTGMHQLVFSDGSTNKLRNLQKLVIDDSKLAIVLSKQISHISLC HHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEHHHHHHHHH SKPIEKIGALTKNMFNDLRGNNYLTYMRVWEKMFSILLFSKKQEQEDELFAVSGELLEHI HHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH AHLKPSSDFNPVNKDGKEEINKSEKMILDELSNNIQDTLQKYLLYSMFQPLALFDGDSRD HHCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHH KFAKKISSILKKYLQSTHNEFSEALIIKYIIDSFRATNLFPQHYVIYPLLNYLENYDGDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCE FDVDVFNTDSLNFLELDNQKLDTTPRFIHLYEYQLFFALKNLKSENHLTECSKSTCSTSD EEEEEECCCCCEEEEECCCCCCCCCCEEEEHHHHHHHHHHHCCCCCHHHHHHHHCCCCCC SPLCCYLQKANSIFGKRTYNNWGSQYDSHVTVTPYLCMEYGENPNPVHPTKITIYSDDKP CCEEEEEEHHHHHHCCCCCCCCCCCCCCEEEECHHHHHHCCCCCCCCCCEEEEEECCCCH LKKIRVGLVNLRITEKNLRQSFEPLEMPPNISLERWLLISQALNSAVKDKCDLVIFPECS HHHHHEEHEEEEEEHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCC IPNRWLPKLTHWSKQHQIGLVFGLEYIYNTKSPDTSPSNNTGSEKCIAFNLTTALLPFQI CCCCCCHHHHCCCCCCCEEEEEEEHHHCCCCCCCCCCCCCCCCCCEEEEEEHHEEEEEEE NDKYKSCCVSLRIKNHYGPQEEKELNMCGYSLPDLGTSTYHLYNWRGNQFTIYNCFELAD CCHHHCEEEEEEEECCCCCCCHHHHHHCCCCCCCCCCCEEEEEEEECCEEEEEEEHHHHH IQHRAIFRSELDFLIACSVNRDVNYFMDILESVVRDIHCYVIYSNTSEYGCSRIIQPKKH HHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCEEEEEEECCCCCHHHHHCCCCCCC EERNIGQIGGGTNCTLLAGDLDIDALRKFQSHQYDETDNSFKPLPPGFDIKKVIERSVE CCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA