| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485749
Identifier: 124485749
GI number: 124485749
Start: 923574
End: 923903
Strand: Reverse
Name: 124485749
Synonym: Mlab_0927
Alternate gene names: NA
Gene position: 923903-923574 (Counterclockwise)
Preceding gene: 124485751
Following gene: 124485748
Centisome position: 51.19
GC content: 45.76
Gene sequence:
>330_bases ATGTCAGAATATGTAAGCATCAAAAACCGCGTTCTTACACAACTGTCCGCATCTCTTTCAACTCTCCAGACAGCGTATGG CATTGAGTTCCTCGCTCTCTTCGGTTCAGTCGCACGCGGGGAAGATACACCTTACAGTGACATTGACCTCCTGTATACAT TCAAACCGGAATTCGACACATTCGACAATTATCTTGCTCTCGCTGAGTATCTTGAATCGATCCTGGAACGCAAAGTCGAC CTTGTCTCCTTTGAATATCTCAAACCGCGTATTCGCTCCAACATACAAAAAGACGTCATCTTCTGCGGTACAGGAAAAGC TGCCGTATGA
Upstream 100 bases:
>100_bases TCAACTTGTTCAGCTGAGTCCGTCCACTTTCAGCGTCAACCTCGCCCATAACAGGCAAAACCTCATTACATGCGAAGGAC AAATACTCAGATATTAATCA
Downstream 100 bases:
>100_bases AAACACCGGATATTCTCACATATTTAGATGACATCTGCGAACAATCTGAAAACATCATGGCTGCTGTCAATCGCATGAGT TAAGCGGCAAAACACATCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MSEYVSIKNRVLTQLSASLSTLQTAYGIEFLALFGSVARGEDTPYSDIDLLYTFKPEFDTFDNYLALAEYLESILERKVD LVSFEYLKPRIRSNIQKDVIFCGTGKAAV
Sequences:
>Translated_109_residues MSEYVSIKNRVLTQLSASLSTLQTAYGIEFLALFGSVARGEDTPYSDIDLLYTFKPEFDTFDNYLALAEYLESILERKVD LVSFEYLKPRIRSNIQKDVIFCGTGKAAV >Mature_108_residues SEYVSIKNRVLTQLSASLSTLQTAYGIEFLALFGSVARGEDTPYSDIDLLYTFKPEFDTFDNYLALAEYLESILERKVDL VSFEYLKPRIRSNIQKDVIFCGTGKAAV
Specific function: Unknown
COG id: COG1669
COG function: function code R; Predicted nucleotidyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the M.jannaschii MJ0126/MJ0128/MJ0141/MJ0435/MJ0604/MJ1215/MJ1217/MJ1305/MJ1379 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002934 [H]
Pfam domain/function: PF01909 NTP_transf_2 [H]
EC number: NA
Molecular weight: Translated: 12334; Mature: 12203
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEYVSIKNRVLTQLSASLSTLQTAYGIEFLALFGSVARGEDTPYSDIDLLYTFKPEFDT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCC FDNYLALAEYLESILERKVDLVSFEYLKPRIRSNIQKDVIFCGTGKAAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCEEEECCCCCCC >Mature Secondary Structure SEYVSIKNRVLTQLSASLSTLQTAYGIEFLALFGSVARGEDTPYSDIDLLYTFKPEFDT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCC FDNYLALAEYLESILERKVDLVSFEYLKPRIRSNIQKDVIFCGTGKAAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]