| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485748
Identifier: 124485748
GI number: 124485748
Start: 920835
End: 922922
Strand: Reverse
Name: 124485748
Synonym: Mlab_0926
Alternate gene names: NA
Gene position: 922922-920835 (Counterclockwise)
Preceding gene: 124485749
Following gene: 124485747
Centisome position: 51.13
GC content: 32.95
Gene sequence:
>2088_bases ATGACCGAATATCAATATACAATTCACTTAAGTTATGTAAATAATGAATATTGGGAGGCCTACAGTCCTCAATTTCCAGT ATATGTTGTAGGTGATATTGATAAAAAGATGGCCTGTAGTATATTGATAGAAGTTCTGATTTCCGTTGTAACTCAGTATC TATGGAATGATCAAGAATTACCATTGGGATATAATCATAATATTCCCTATCTCAAATCTTTAAAAGGTAAAAGGGGCATT AACATACTGCCTATTCTTGTTGATGAAGAGAAAGAGTTAGGTCACGCAGGACTGTTACCATCTCAATATGGTTTTCTAGG ATATTATCTCCCCAAAGAGTATTTATTTAGTAAAAAGGGATGGAATAATAGAGTAATACAAAACGCCACTTTAAATGATC ATTCACCACCAATTATATCCGAGAGAGATGTTTTTTTCCCAAAACCATCCCTAAATATATCGTCTCTCCCCAACTTGCTA CCAATTCATATTGGAATAATGAAGGAAGAAATGCTCTCTTTAATTCAGGAATATAATCCAGAACTAAAGATAGGGGCTTC TCTTAATGGTTTAGAAAATGTGAATAAATTCGTTAAATGGGCTACTGATGCAACATATCAGCGACTACACAATCTCATAG CACAATATCCTATACGAGATATATTGGCATGGACTGTATCTCAACATGAACTCATTGCTTATCTTTTCACTCGGGAATAC TATGAGATGGAGGATTTTGATTATACCAAATCCTCAATATTATCAATATTTACTGAACACTACACTCAAAGAGATCAATT GAAAACAGAATTGGAACATTCCATTCAGCATCTAATTGAGATATCTATCGCTGAAAATCCAACAGGTAATCACCCAATAT CCTCTGATGATTATTGTAGATTATTGGCAAATGCAGTGTTATTCACCTCAATTCGAAATATTATGTCTCAAATAAATTTT CTATCTCATAATGATTTATCAAAAAATATTGGGATAAAATTTACCATACGTGGAATTGTTGCATCATCTTATCCTCTTTC AACAGAATGGACGGATTTTCGTATGGGACATACAAAAGATGTTTTAACAATGCGAAATAGAAAATATAAAGCTTATTCTC CAAAGTTATCAATTTCTGAAAAAGAAAAAAATGAGTTTGAAACTGCTTTTTATGATGAATTTGGACTCACATTTAATGAA TTTAATCAGTTCAATTCCTGTCTTTTATCGTTACCTATTAGGCCACCATTTTGTTTTTGCATTTGCTTTGAATCTCAATT GTGCCAGAAACTGATTGCTGATTATGGATGGACAAAAGAAAAAGGGCTTGATGCATTGAATCTCTTCAGTCTGCAACCGA GAGGAGCATGGGATCAAATTGATAGTAATAAAATAGAAGATTTTATTAAAATTGAAGATCATTACCACAAATATTCTTAT TACTCACATCCTATTCTAAGAATCCCAGGTGAGAATGGCGAGAACGAACTTGTCATTGGAATAAGGAGTTGGAATGTGTT TGTTACAGATTTCCTTCTTTATATTCAACATGGAGGTTATGATGCTAAGTCTGATAGAATGAATAAATGGATATCAAGAT TTAGAAATCTGGAAGGTAAAGCTTTTGAGATGGCTGTAGAAAACTGGTTTAAGAAGAACACAACATTTGTGGTTCGAAGG GCACTTAAGCCAAAGGAGATAATAAAAGGTCGGGCAGATATTGGGGATATTGATATAGGGTTAGCTGATTTAAATAATTC CATTTTCTATTCAATAGAATGTAAAAATTATTTATCTCCTCATGAAATGAAAAAAATTGAAGATTTGAATTATAAATTTT CACGAAAAGAGATCAATAAGACACCCGCATATAAACATCAAAGACGTCATAAATGGCTTTGTTCACATCAAAAAGAAGTA AAGGAATACTTTGGATACACTTCCCCTCCTCAAATCATATCTCTGTTCATCGTATCTCACGATGGCTCCCCGTCTCACTT TGATGGCATGATATTCCCAGTAATACCTTTTTCTGATTTAATGAATACTGGTCAAAAATGTTTGGAACACATTGCTATGA AAAAGTAA
Upstream 100 bases:
>100_bases GATAATGCATGTATTAATTCGATATTAATGCTGTTGCTTCATGTCTAAGCTAAGAAACTGTGAGATGTGATTAATGAAAA ATCTGGTAAATTTGTATTAA
Downstream 100 bases:
>100_bases ACCTGGAGTAATTTTTGGCTATGGGGTGGGGGGTATATTGTTTAAGTATCTGTGAGATTAATATGTACACCAGGTTCGAA CATGTACCTCAAGATACACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 695; Mature: 694
Protein sequence:
>695_residues MTEYQYTIHLSYVNNEYWEAYSPQFPVYVVGDIDKKMACSILIEVLISVVTQYLWNDQELPLGYNHNIPYLKSLKGKRGI NILPILVDEEKELGHAGLLPSQYGFLGYYLPKEYLFSKKGWNNRVIQNATLNDHSPPIISERDVFFPKPSLNISSLPNLL PIHIGIMKEEMLSLIQEYNPELKIGASLNGLENVNKFVKWATDATYQRLHNLIAQYPIRDILAWTVSQHELIAYLFTREY YEMEDFDYTKSSILSIFTEHYTQRDQLKTELEHSIQHLIEISIAENPTGNHPISSDDYCRLLANAVLFTSIRNIMSQINF LSHNDLSKNIGIKFTIRGIVASSYPLSTEWTDFRMGHTKDVLTMRNRKYKAYSPKLSISEKEKNEFETAFYDEFGLTFNE FNQFNSCLLSLPIRPPFCFCICFESQLCQKLIADYGWTKEKGLDALNLFSLQPRGAWDQIDSNKIEDFIKIEDHYHKYSY YSHPILRIPGENGENELVIGIRSWNVFVTDFLLYIQHGGYDAKSDRMNKWISRFRNLEGKAFEMAVENWFKKNTTFVVRR ALKPKEIIKGRADIGDIDIGLADLNNSIFYSIECKNYLSPHEMKKIEDLNYKFSRKEINKTPAYKHQRRHKWLCSHQKEV KEYFGYTSPPQIISLFIVSHDGSPSHFDGMIFPVIPFSDLMNTGQKCLEHIAMKK
Sequences:
>Translated_695_residues MTEYQYTIHLSYVNNEYWEAYSPQFPVYVVGDIDKKMACSILIEVLISVVTQYLWNDQELPLGYNHNIPYLKSLKGKRGI NILPILVDEEKELGHAGLLPSQYGFLGYYLPKEYLFSKKGWNNRVIQNATLNDHSPPIISERDVFFPKPSLNISSLPNLL PIHIGIMKEEMLSLIQEYNPELKIGASLNGLENVNKFVKWATDATYQRLHNLIAQYPIRDILAWTVSQHELIAYLFTREY YEMEDFDYTKSSILSIFTEHYTQRDQLKTELEHSIQHLIEISIAENPTGNHPISSDDYCRLLANAVLFTSIRNIMSQINF LSHNDLSKNIGIKFTIRGIVASSYPLSTEWTDFRMGHTKDVLTMRNRKYKAYSPKLSISEKEKNEFETAFYDEFGLTFNE FNQFNSCLLSLPIRPPFCFCICFESQLCQKLIADYGWTKEKGLDALNLFSLQPRGAWDQIDSNKIEDFIKIEDHYHKYSY YSHPILRIPGENGENELVIGIRSWNVFVTDFLLYIQHGGYDAKSDRMNKWISRFRNLEGKAFEMAVENWFKKNTTFVVRR ALKPKEIIKGRADIGDIDIGLADLNNSIFYSIECKNYLSPHEMKKIEDLNYKFSRKEINKTPAYKHQRRHKWLCSHQKEV KEYFGYTSPPQIISLFIVSHDGSPSHFDGMIFPVIPFSDLMNTGQKCLEHIAMKK >Mature_694_residues TEYQYTIHLSYVNNEYWEAYSPQFPVYVVGDIDKKMACSILIEVLISVVTQYLWNDQELPLGYNHNIPYLKSLKGKRGIN ILPILVDEEKELGHAGLLPSQYGFLGYYLPKEYLFSKKGWNNRVIQNATLNDHSPPIISERDVFFPKPSLNISSLPNLLP IHIGIMKEEMLSLIQEYNPELKIGASLNGLENVNKFVKWATDATYQRLHNLIAQYPIRDILAWTVSQHELIAYLFTREYY EMEDFDYTKSSILSIFTEHYTQRDQLKTELEHSIQHLIEISIAENPTGNHPISSDDYCRLLANAVLFTSIRNIMSQINFL SHNDLSKNIGIKFTIRGIVASSYPLSTEWTDFRMGHTKDVLTMRNRKYKAYSPKLSISEKEKNEFETAFYDEFGLTFNEF NQFNSCLLSLPIRPPFCFCICFESQLCQKLIADYGWTKEKGLDALNLFSLQPRGAWDQIDSNKIEDFIKIEDHYHKYSYY SHPILRIPGENGENELVIGIRSWNVFVTDFLLYIQHGGYDAKSDRMNKWISRFRNLEGKAFEMAVENWFKKNTTFVVRRA LKPKEIIKGRADIGDIDIGLADLNNSIFYSIECKNYLSPHEMKKIEDLNYKFSRKEINKTPAYKHQRRHKWLCSHQKEVK EYFGYTSPPQIISLFIVSHDGSPSHFDGMIFPVIPFSDLMNTGQKCLEHIAMKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81024; Mature: 80892
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEYQYTIHLSYVNNEYWEAYSPQFPVYVVGDIDKKMACSILIEVLISVVTQYLWNDQEL CCCEEEEEEEEEECCCHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCC PLGYNHNIPYLKSLKGKRGINILPILVDEEKELGHAGLLPSQYGFLGYYLPKEYLFSKKG CCCCCCCCCHHHHCCCCCCCEEEEEEECCCHHCCCCCCCCCCCCCEEEECCHHHHHCCCC WNNRVIQNATLNDHSPPIISERDVFFPKPSLNISSLPNLLPIHIGIMKEEMLSLIQEYNP CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEHHHHHHHHHHHHHHHHCCC ELKIGASLNGLENVNKFVKWATDATYQRLHNLIAQYPIRDILAWTVSQHELIAYLFTREY CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHH YEMEDFDYTKSSILSIFTEHYTQRDQLKTELEHSIQHLIEISIAENPTGNHPISSDDYCR HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHH LLANAVLFTSIRNIMSQINFLSHNDLSKNIGIKFTIRGIVASSYPLSTEWTDFRMGHTKD HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHH VLTMRNRKYKAYSPKLSISEKEKNEFETAFYDEFGLTFNEFNQFNSCLLSLPIRPPFCFC HHHHCCCCCEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHEEECCCCCCEEEE ICFESQLCQKLIADYGWTKEKGLDALNLFSLQPRGAWDQIDSNKIEDFIKIEDHYHKYSY EEEHHHHHHHHHHHCCCCHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHE YSHPILRIPGENGENELVIGIRSWNVFVTDFLLYIQHGGYDAKSDRMNKWISRFRNLEGK ECCCEEECCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCH AFEMAVENWFKKNTTFVVRRALKPKEIIKGRADIGDIDIGLADLNNSIFYSIECKNYLSP HHHHHHHHHHHCCCHHHHHHHCCCHHHHCCCCCCCCCEEEHEECCCCEEEEEEECCCCCH HEMKKIEDLNYKFSRKEINKTPAYKHQRRHKWLCSHQKEVKEYFGYTSPPQIISLFIVSH HHHHHHHHCCCEECHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEEEC DGSPSHFDGMIFPVIPFSDLMNTGQKCLEHIAMKK CCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TEYQYTIHLSYVNNEYWEAYSPQFPVYVVGDIDKKMACSILIEVLISVVTQYLWNDQEL CCEEEEEEEEEECCCHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCC PLGYNHNIPYLKSLKGKRGINILPILVDEEKELGHAGLLPSQYGFLGYYLPKEYLFSKKG CCCCCCCCCHHHHCCCCCCCEEEEEEECCCHHCCCCCCCCCCCCCEEEECCHHHHHCCCC WNNRVIQNATLNDHSPPIISERDVFFPKPSLNISSLPNLLPIHIGIMKEEMLSLIQEYNP CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEHHHHHHHHHHHHHHHHCCC ELKIGASLNGLENVNKFVKWATDATYQRLHNLIAQYPIRDILAWTVSQHELIAYLFTREY CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHH YEMEDFDYTKSSILSIFTEHYTQRDQLKTELEHSIQHLIEISIAENPTGNHPISSDDYCR HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHH LLANAVLFTSIRNIMSQINFLSHNDLSKNIGIKFTIRGIVASSYPLSTEWTDFRMGHTKD HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHH VLTMRNRKYKAYSPKLSISEKEKNEFETAFYDEFGLTFNEFNQFNSCLLSLPIRPPFCFC HHHHCCCCCEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHEEECCCCCCEEEE ICFESQLCQKLIADYGWTKEKGLDALNLFSLQPRGAWDQIDSNKIEDFIKIEDHYHKYSY EEEHHHHHHHHHHHCCCCHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHE YSHPILRIPGENGENELVIGIRSWNVFVTDFLLYIQHGGYDAKSDRMNKWISRFRNLEGK ECCCEEECCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCH AFEMAVENWFKKNTTFVVRRALKPKEIIKGRADIGDIDIGLADLNNSIFYSIECKNYLSP HHHHHHHHHHHCCCHHHHHHHCCCHHHHCCCCCCCCCEEEHEECCCCEEEEEEECCCCCH HEMKKIEDLNYKFSRKEINKTPAYKHQRRHKWLCSHQKEVKEYFGYTSPPQIISLFIVSH HHHHHHHHCCCEECHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEEEC DGSPSHFDGMIFPVIPFSDLMNTGQKCLEHIAMKK CCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA