Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124485739

Identifier: 124485739

GI number: 124485739

Start: 912493

End: 914316

Strand: Reverse

Name: 124485739

Synonym: Mlab_0917

Alternate gene names: NA

Gene position: 914316-912493 (Counterclockwise)

Preceding gene: 124485740

Following gene: 124485738

Centisome position: 50.66

GC content: 54.93

Gene sequence:

>1824_bases
ATGACCGACGATCCTGTTGCAACCGCGAAAAACCTCTCAGTCGGCATGGAACTTTTCAATGCCGGAAAATATTCGGAGGT
CATCTCCTTTTCATCCGGCACGAGCGACCCCGCTCTCCTTCTTTTAGCTGCCAGAAGCTACATGGAAACAGGTCTCTACG
ACACCGCCGGATCCCTTTTGAAAGATCTCATCCGGCTCATGCCGGCTTCTTCGTATCTGCACAGTTATCTCGGTCTCGTT
CTTGAACATTCGGATACGATCAAAGCCGCCGAAGAGTATGCGACCGCCCTGATCCTCGACCCGGAGAACAAAACCGCTCT
TCGAAGATATTCGTCTCTTCTTCTCGCAAACGAGGATCTGCGTGGCGCCATTCCCTCGCTTCGTGCTCTGGTCAGGCTGG
AAAACCGCCCCGAAGACATCAGAACACTTATGCAGACGCTTACCCGCGTCGGCGAGCCGAGCGAAGCGATTGCTCTCCAT
ATCCAGAACTTCGGCGGCGAGACATTCAGTCACGAGTACATCGATGCACTGTATACGGAAAAGGAGTATCAGAAGGCGAT
GCAGCTTTCCCTTCGGGCATGGAACGCCGTCAAAGACACGGTCTATCTCAGGCAGAGTCTCGAGGCGCTTGCCGCACTCG
ATCCGGCCGGGGCCGAGCGGGCATACCGCTCGGCGCTCGACAGTCTCGAAGAGGCAGGCGTCGAAGACGAAACCGTTTCG
CAGATCCGGTTCTCCTACATCCTTCTCGAAAAACTTCTCGGGAACTATACCTCTGCGAGGTATGAGCTGGGTGAACTTCT
CAAAACCGCAAACGATCCGGTATACCGCCTGCTTTTCGCCGAACTCGAGTCACGTCTTGAAAACGACGATGCGGCGAACA
GCGTGTACCGGGGTTTGATCACCCAGCTCTGCAGTGCCGACGACGCCGATCCACTTCTTCAGGAACTGGTCATCTCCAAA
TTCACCGCATTTCTCTCGACCGTACGCACGAAAGAAGAGGTGGCTGGAATCATCAGCGTCATCCTCTCGCCGTATCCGAC
CCCGGTATGTCTTGCCTGGATCGGCAAAGCATACGAAGACGCCGGCTCCCTTTCGCAGGCACGCGACTGGTACTACCGTG
CCTACCGTGCGGACTTCATCAAAGGCGGCATCTCCTATGCCGGTTTTCTCAAACGGAGCGGGGACGAACGTGAGTGCGAG
ACGACGATCCGGTATATGGTCGCGAATACCGTTAAAGTCCGCGACATCGAGACGATCGCCGATGCCGTCTTCAACGGCGG
GGAAGAGATCTATAAAATTGCCAAAGCCAAGGATATGATCATCAAAAAGCTCGGCAGCGTCACGGATCGGCTCTCTTCGA
ACGGCCGCGAGATGCTTTCGGCAGGATATCTGTATTCTGCAGTCGATTCTTTGGAGCGGCAGGATTACGAGACCTGCAAA
TGGTGCTGTCTTGCAGGAATCGACGTCCTTCCCTGCTATCCTGAAAAGATCCGCGTCGAGGATTTCATGGATGTCCTTTC
GCGTCTGAAAGGCCGGGTGCTCGCCGAGCGTCCGGTCATCGTTGAAACACAGGAAGAAGAGGAGGAGCCGGATGTCCAAA
ACAGCGATCTTTCGTTTCTCGATGAACGCGAGTCGACTGTCTTCATTTTCTTAAAAGAGCACCGCGAAGCAACGGAAATG
GATCTTCGCGCCGTTCTCGAGACCCGGCGGGTCACCGGGATCGTAAACTCGATGCTGGCGAAACTTGCCGAACACGGGAT
CTCTTTAATAGAGAAACGCGGTGTGGGCGAACGCGGCGAGGTATACGGCTATGTCGGAACATAA

Upstream 100 bases:

>100_bases
GGATAAAGTCGTCGCTGACGGCAGCATTGTCACTGCCCAAACCCCCTTCGATGCCGAGGAGTTCGGACGCGCCATCCTCT
CGGTAATACGCTGAAAAAAC

Downstream 100 bases:

>100_bases
CGGACACATTGACCGAAAACTGGAAAGTATCGGGATAATCAATGCTCTTCGCCGGGGAACGGTGCCTCAGGCGGGACTTG
CCCGTCTCGCGGTCGGTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 607; Mature: 606

Protein sequence:

>607_residues
MTDDPVATAKNLSVGMELFNAGKYSEVISFSSGTSDPALLLLAARSYMETGLYDTAGSLLKDLIRLMPASSYLHSYLGLV
LEHSDTIKAAEEYATALILDPENKTALRRYSSLLLANEDLRGAIPSLRALVRLENRPEDIRTLMQTLTRVGEPSEAIALH
IQNFGGETFSHEYIDALYTEKEYQKAMQLSLRAWNAVKDTVYLRQSLEALAALDPAGAERAYRSALDSLEEAGVEDETVS
QIRFSYILLEKLLGNYTSARYELGELLKTANDPVYRLLFAELESRLENDDAANSVYRGLITQLCSADDADPLLQELVISK
FTAFLSTVRTKEEVAGIISVILSPYPTPVCLAWIGKAYEDAGSLSQARDWYYRAYRADFIKGGISYAGFLKRSGDERECE
TTIRYMVANTVKVRDIETIADAVFNGGEEIYKIAKAKDMIIKKLGSVTDRLSSNGREMLSAGYLYSAVDSLERQDYETCK
WCCLAGIDVLPCYPEKIRVEDFMDVLSRLKGRVLAERPVIVETQEEEEEPDVQNSDLSFLDERESTVFIFLKEHREATEM
DLRAVLETRRVTGIVNSMLAKLAEHGISLIEKRGVGERGEVYGYVGT

Sequences:

>Translated_607_residues
MTDDPVATAKNLSVGMELFNAGKYSEVISFSSGTSDPALLLLAARSYMETGLYDTAGSLLKDLIRLMPASSYLHSYLGLV
LEHSDTIKAAEEYATALILDPENKTALRRYSSLLLANEDLRGAIPSLRALVRLENRPEDIRTLMQTLTRVGEPSEAIALH
IQNFGGETFSHEYIDALYTEKEYQKAMQLSLRAWNAVKDTVYLRQSLEALAALDPAGAERAYRSALDSLEEAGVEDETVS
QIRFSYILLEKLLGNYTSARYELGELLKTANDPVYRLLFAELESRLENDDAANSVYRGLITQLCSADDADPLLQELVISK
FTAFLSTVRTKEEVAGIISVILSPYPTPVCLAWIGKAYEDAGSLSQARDWYYRAYRADFIKGGISYAGFLKRSGDERECE
TTIRYMVANTVKVRDIETIADAVFNGGEEIYKIAKAKDMIIKKLGSVTDRLSSNGREMLSAGYLYSAVDSLERQDYETCK
WCCLAGIDVLPCYPEKIRVEDFMDVLSRLKGRVLAERPVIVETQEEEEEPDVQNSDLSFLDERESTVFIFLKEHREATEM
DLRAVLETRRVTGIVNSMLAKLAEHGISLIEKRGVGERGEVYGYVGT
>Mature_606_residues
TDDPVATAKNLSVGMELFNAGKYSEVISFSSGTSDPALLLLAARSYMETGLYDTAGSLLKDLIRLMPASSYLHSYLGLVL
EHSDTIKAAEEYATALILDPENKTALRRYSSLLLANEDLRGAIPSLRALVRLENRPEDIRTLMQTLTRVGEPSEAIALHI
QNFGGETFSHEYIDALYTEKEYQKAMQLSLRAWNAVKDTVYLRQSLEALAALDPAGAERAYRSALDSLEEAGVEDETVSQ
IRFSYILLEKLLGNYTSARYELGELLKTANDPVYRLLFAELESRLENDDAANSVYRGLITQLCSADDADPLLQELVISKF
TAFLSTVRTKEEVAGIISVILSPYPTPVCLAWIGKAYEDAGSLSQARDWYYRAYRADFIKGGISYAGFLKRSGDERECET
TIRYMVANTVKVRDIETIADAVFNGGEEIYKIAKAKDMIIKKLGSVTDRLSSNGREMLSAGYLYSAVDSLERQDYETCKW
CCLAGIDVLPCYPEKIRVEDFMDVLSRLKGRVLAERPVIVETQEEEEEPDVQNSDLSFLDERESTVFIFLKEHREATEMD
LRAVLETRRVTGIVNSMLAKLAEHGISLIEKRGVGERGEVYGYVGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67813; Mature: 67681

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDDPVATAKNLSVGMELFNAGKYSEVISFSSGTSDPALLLLAARSYMETGLYDTAGSLL
CCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHH
KDLIRLMPASSYLHSYLGLVLEHSDTIKAAEEYATALILDPENKTALRRYSSLLLANEDL
HHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHCCCHH
RGAIPSLRALVRLENRPEDIRTLMQTLTRVGEPSEAIALHIQNFGGETFSHEYIDALYTE
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHEEEEHHCCCCCCHHHHHHHHHHH
KEYQKAMQLSLRAWNAVKDTVYLRQSLEALAALDPAGAERAYRSALDSLEEAGVEDETVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHH
QIRFSYILLEKLLGNYTSARYELGELLKTANDPVYRLLFAELESRLENDDAANSVYRGLI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
TQLCSADDADPLLQELVISKFTAFLSTVRTKEEVAGIISVILSPYPTPVCLAWIGKAYED
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
AGSLSQARDWYYRAYRADFIKGGISYAGFLKRSGDERECETTIRYMVANTVKVRDIETIA
HCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
DAVFNGGEEIYKIAKAKDMIIKKLGSVTDRLSSNGREMLSAGYLYSAVDSLERQDYETCK
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHH
WCCLAGIDVLPCYPEKIRVEDFMDVLSRLKGRVLAERPVIVETQEEEEEPDVQNSDLSFL
HHHHCCCCCCCCCCHHCCHHHHHHHHHHHHCCEECCCCEEEECCCCCCCCCCCCCCCHHH
DERESTVFIFLKEHREATEMDLRAVLETRRVTGIVNSMLAKLAEHGISLIEKRGVGERGE
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VYGYVGT
EEEECCC
>Mature Secondary Structure 
TDDPVATAKNLSVGMELFNAGKYSEVISFSSGTSDPALLLLAARSYMETGLYDTAGSLL
CCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHH
KDLIRLMPASSYLHSYLGLVLEHSDTIKAAEEYATALILDPENKTALRRYSSLLLANEDL
HHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHCCCHH
RGAIPSLRALVRLENRPEDIRTLMQTLTRVGEPSEAIALHIQNFGGETFSHEYIDALYTE
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHEEEEHHCCCCCCHHHHHHHHHHH
KEYQKAMQLSLRAWNAVKDTVYLRQSLEALAALDPAGAERAYRSALDSLEEAGVEDETVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHH
QIRFSYILLEKLLGNYTSARYELGELLKTANDPVYRLLFAELESRLENDDAANSVYRGLI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
TQLCSADDADPLLQELVISKFTAFLSTVRTKEEVAGIISVILSPYPTPVCLAWIGKAYED
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
AGSLSQARDWYYRAYRADFIKGGISYAGFLKRSGDERECETTIRYMVANTVKVRDIETIA
HCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
DAVFNGGEEIYKIAKAKDMIIKKLGSVTDRLSSNGREMLSAGYLYSAVDSLERQDYETCK
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHH
WCCLAGIDVLPCYPEKIRVEDFMDVLSRLKGRVLAERPVIVETQEEEEEPDVQNSDLSFL
HHHHCCCCCCCCCCHHCCHHHHHHHHHHHHCCEECCCCEEEECCCCCCCCCCCCCCCHHH
DERESTVFIFLKEHREATEMDLRAVLETRRVTGIVNSMLAKLAEHGISLIEKRGVGERGE
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VYGYVGT
EEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA