| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485738
Identifier: 124485738
GI number: 124485738
Start: 911214
End: 912506
Strand: Reverse
Name: 124485738
Synonym: Mlab_0916
Alternate gene names: NA
Gene position: 912506-911214 (Counterclockwise)
Preceding gene: 124485739
Following gene: 124485735
Centisome position: 50.56
GC content: 55.76
Gene sequence:
>1293_bases ATGTCGGAACATAACGGACACATTGACCGAAAACTGGAAAGTATCGGGATAATCAATGCTCTTCGCCGGGGAACGGTGCC TCAGGCGGGACTTGCCCGTCTCGCGGTCGGTCTTTCGACCGAAGAGAAGGTAATTAGATCTCAGCTTGAATACGTGGCAT CCGGGCATGCGGACTGTAAATTCGTTCGCGGCGAGTATGGTTCGGGAAAAACGTTTCTGATCTCCCGTGCGGTCGAGATT GGACAGAAGCAGCGTTTCGTCACCTCGCATGTCGTTATCTCGCCGGACACGCCGCTGCATAAACTGCAGGCGATCTATGC AAGGATCTGTTCGGGGCTGACCACGGGGACTGAGGATCATGCCCTCAAAAGCATCATCGACACCTGGATCTACGGGATCG AGGACCGTCTGATCAGCACGGGGATCGGCGAGGACGATCCGCGTCTCGTCGAGCTGACGGAAAAGGAGATCGAGTCGGTC CTCGAACGGGTGAGCGGGATGAACTCCGGTCTCGCCTCGGCCCTTCGGACTTATTATCAGGCAAACAACAAAGGGGATTT TGCAACCGCCCAGGCGGCGATCGGCTGGGTGTCGGGCGAACCGACGGTCGGGAGAAGTTTCAAAGCTCAGGCGGGTCTGA AAGGCGGGGTCACCGAAGGCGACGCCCTTCAGTTCCTGAAAGGTCTCGTATATGTGATGACCCAGGCGGGGTATGCCGGT CTTTTGGTCAGCTTCGACGAAGCAGAAACGGCTCAGGCGTTTGCCCGTCCCCAGCGCGAAAAAGGCTACATCAATCTCCG GCAGATCGTCGATATGATCGATAAAAACGACCTGCCGAACTGTTTCTTCCTGTTTGCCGGGACGCCGGCATTCTTCGACA GCTCAAAGGGCATCCGTTCTCTCCCGCCGCTCTTTGATCGGATCGGGATCATCGCCGACGACGGGTTTTCAAATCCGATG CAGACCCAGATCGTTTTGTCCAAGTTCGATGCGGCAAAACTCGGCGAGGCAGCCGGCAAGGTCATGGATATCTATGCCGA GGCATATCAGGAAGTGGATAAATCAAGGGTCTCGCCGAAGTTCATAAAAACGATGATCGACAAGGTGACCAGCCGGTTCG GCGGCCGGGTCGATGTGGTGCCGAGGCTTTACCTGCGCGAGTTCGTGGATGTGCTGGATAAATGCGCCCTGTATCCAAAT TATCAGCCGATGGAAAAGTATGTGTTCGAGCCGGTGAAGGATGCGGCAGGGCTGAAAGAAGAAGAAAAGGCCGTAATGGA AGTGTCATGGTGA
Upstream 100 bases:
>100_bases GTCACCGGGATCGTAAACTCGATGCTGGCGAAACTTGCCGAACACGGGATCTCTTTAATAGAGAAACGCGGTGTGGGCGA ACGCGGCGAGGTATACGGCT
Downstream 100 bases:
>100_bases TGCGAAGCAGCGCCAGGTCCGAGCAAATCTTTGATTTGTGATTTCTGGTGACATGCAATGTCACCAAGGCTGAGCAAGAA GTCAATGTAAGGATTGCATG
Product: adenosylhomocysteinase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 430; Mature: 429
Protein sequence:
>430_residues MSEHNGHIDRKLESIGIINALRRGTVPQAGLARLAVGLSTEEKVIRSQLEYVASGHADCKFVRGEYGSGKTFLISRAVEI GQKQRFVTSHVVISPDTPLHKLQAIYARICSGLTTGTEDHALKSIIDTWIYGIEDRLISTGIGEDDPRLVELTEKEIESV LERVSGMNSGLASALRTYYQANNKGDFATAQAAIGWVSGEPTVGRSFKAQAGLKGGVTEGDALQFLKGLVYVMTQAGYAG LLVSFDEAETAQAFARPQREKGYINLRQIVDMIDKNDLPNCFFLFAGTPAFFDSSKGIRSLPPLFDRIGIIADDGFSNPM QTQIVLSKFDAAKLGEAAGKVMDIYAEAYQEVDKSRVSPKFIKTMIDKVTSRFGGRVDVVPRLYLREFVDVLDKCALYPN YQPMEKYVFEPVKDAAGLKEEEKAVMEVSW
Sequences:
>Translated_430_residues MSEHNGHIDRKLESIGIINALRRGTVPQAGLARLAVGLSTEEKVIRSQLEYVASGHADCKFVRGEYGSGKTFLISRAVEI GQKQRFVTSHVVISPDTPLHKLQAIYARICSGLTTGTEDHALKSIIDTWIYGIEDRLISTGIGEDDPRLVELTEKEIESV LERVSGMNSGLASALRTYYQANNKGDFATAQAAIGWVSGEPTVGRSFKAQAGLKGGVTEGDALQFLKGLVYVMTQAGYAG LLVSFDEAETAQAFARPQREKGYINLRQIVDMIDKNDLPNCFFLFAGTPAFFDSSKGIRSLPPLFDRIGIIADDGFSNPM QTQIVLSKFDAAKLGEAAGKVMDIYAEAYQEVDKSRVSPKFIKTMIDKVTSRFGGRVDVVPRLYLREFVDVLDKCALYPN YQPMEKYVFEPVKDAAGLKEEEKAVMEVSW >Mature_429_residues SEHNGHIDRKLESIGIINALRRGTVPQAGLARLAVGLSTEEKVIRSQLEYVASGHADCKFVRGEYGSGKTFLISRAVEIG QKQRFVTSHVVISPDTPLHKLQAIYARICSGLTTGTEDHALKSIIDTWIYGIEDRLISTGIGEDDPRLVELTEKEIESVL ERVSGMNSGLASALRTYYQANNKGDFATAQAAIGWVSGEPTVGRSFKAQAGLKGGVTEGDALQFLKGLVYVMTQAGYAGL LVSFDEAETAQAFARPQREKGYINLRQIVDMIDKNDLPNCFFLFAGTPAFFDSSKGIRSLPPLFDRIGIIADDGFSNPMQ TQIVLSKFDAAKLGEAAGKVMDIYAEAYQEVDKSRVSPKFIKTMIDKVTSRFGGRVDVVPRLYLREFVDVLDKCALYPNY QPMEKYVFEPVKDAAGLKEEEKAVMEVSW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47348; Mature: 47216
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEHNGHIDRKLESIGIINALRRGTVPQAGLARLAVGLSTEEKVIRSQLEYVASGHADCK CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEE FVRGEYGSGKTFLISRAVEIGQKQRFVTSHVVISPDTPLHKLQAIYARICSGLTTGTEDH EECCCCCCCCEEHHHHHHHHHHHHHEEHEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHH ALKSIIDTWIYGIEDRLISTGIGEDDPRLVELTEKEIESVLERVSGMNSGLASALRTYYQ HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH ANNKGDFATAQAAIGWVSGEPTVGRSFKAQAGLKGGVTEGDALQFLKGLVYVMTQAGYAG CCCCCCHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCE LLVSFDEAETAQAFARPQREKGYINLRQIVDMIDKNDLPNCFFLFAGTPAFFDSSKGIRS EEEECCCHHHHHHHHCCCHHCCCEEHHHHHHHHCCCCCCCEEEEEECCHHHHCCCCCCCC LPPLFDRIGIIADDGFSNPMQTQIVLSKFDAAKLGEAAGKVMDIYAEAYQEVDKSRVSPK CCHHHHHCCEEECCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH FIKTMIDKVTSRFGGRVDVVPRLYLREFVDVLDKCALYPNYQPMEKYVFEPVKDAAGLKE HHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCH EEKAVMEVSW HHHHHHCCCC >Mature Secondary Structure SEHNGHIDRKLESIGIINALRRGTVPQAGLARLAVGLSTEEKVIRSQLEYVASGHADCK CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEE FVRGEYGSGKTFLISRAVEIGQKQRFVTSHVVISPDTPLHKLQAIYARICSGLTTGTEDH EECCCCCCCCEEHHHHHHHHHHHHHEEHEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHH ALKSIIDTWIYGIEDRLISTGIGEDDPRLVELTEKEIESVLERVSGMNSGLASALRTYYQ HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH ANNKGDFATAQAAIGWVSGEPTVGRSFKAQAGLKGGVTEGDALQFLKGLVYVMTQAGYAG CCCCCCHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCE LLVSFDEAETAQAFARPQREKGYINLRQIVDMIDKNDLPNCFFLFAGTPAFFDSSKGIRS EEEECCCHHHHHHHHCCCHHCCCEEHHHHHHHHCCCCCCCEEEEEECCHHHHCCCCCCCC LPPLFDRIGIIADDGFSNPMQTQIVLSKFDAAKLGEAAGKVMDIYAEAYQEVDKSRVSPK CCHHHHHCCEEECCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH FIKTMIDKVTSRFGGRVDVVPRLYLREFVDVLDKCALYPNYQPMEKYVFEPVKDAAGLKE HHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCH EEKAVMEVSW HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA