Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124485724

Identifier: 124485724

GI number: 124485724

Start: 894203

End: 895600

Strand: Reverse

Name: 124485724

Synonym: Mlab_0902

Alternate gene names: NA

Gene position: 895600-894203 (Counterclockwise)

Preceding gene: 124485725

Following gene: 124485723

Centisome position: 49.62

GC content: 41.27

Gene sequence:

>1398_bases
ATGGCAAAACAGTGTGATGTTTTGATTCTTGGTGCGGGCCCAGCGGGGCTTACTGCGGGCTATAAATTGGCTGAGGCTGG
TGTATCTATTTGCATTGTAGATAAACAGGAGCATGTTGGTGGACTTGCCAAAACTCTGCGGCACGGTGACTGTTTATTGG
ATATTGGGCCTCATATTCTCTGTAGTAGGGAATATGTCTATGATTTCAATCCTGAGATGTATACATTTATCAAGGCTCTA
TTACAGGAGGATATTTATGAGTATGAGTCTGAACACCGAAAATATCTCGAATCTATGCAGGTGGGTCAAGTCCGCTATAA
ATATCCGGTAAGCATAATGAACGCTCTCATAAACGCTGGGCTTGGAAAATCCATGCATATAGGCTGGGACTATTTGCGTG
CCAAATCTTCTAAAAAGTCAAATAGTAATGATTATGAAACCAGCCTTGTTTCATCTCTTGGACAATCATTAGCAGAGTTA
TTTTTATTGAATATTGGGGAGAAAACGTGGGGGGTGCCCTGTGGTGCTATGTCACAGGATGTTGCATGGAGAGTTGGTGA
ATTCTCGATGCTGGACGTTTTCAAAAAACAGTTCAGCACTATGATCGCCTCCCTCCAGAAGAAAGGGGATCCTGTTAACT
ATCCAAAACACGGTATTGGGGAGATATGTGACAGACTCAAGCAGGAGATCGATGCTAAAAATATTTGTGACTGGTTCCTC
TCTGCGACTCCAAGTAATATCTTGGTGGAGAATGGTTCGGTTGTATCGGTTGATGTTGTCTGTAGTGATGGTAATGTAGA
GACAATATATCCCAAACATCTCATCTCCTCAATACCTATGCCTTATTTATTAAGTGCTATGCGTCCTTTCCCGCCAGAGG
ATGTACAGGCTGCCGGTCAGAGTCTTCGATGCCGATGTCATATTTGTGTATATCTTGTGTTCTCTGTCGATAGTATTCTC
AAAGAGCATTGTATCTATTTTGCTGATCCAAAAATTCCCTTTTCCAGAATGATGGAGCAAAAACACTATTCTGATATGAT
GATTTCTGATGGTAAGACGGTTCTTGCCATAGAATATTTTAGCTGGATTGAGGGTGGCATTTGGAGCATGAAGGATCAGG
AGCTTTATGATTTAACTGTTGAATGGCTGAAGCGTTTGTCGATAATACAGAATCAGGATATAATTGATTACTTTATTAAC
AGGGAGACTGATGCATATCCTGCTTATGAGTTGGGATACCGGCAGCATCTGGAGAAGGTCATGAGTTATCTGGATGGTAT
CACTAATCTTGATGTTATTGGGAGGACCGGGTCATTCACATATATTGGACAGTATAAGGCGATGCAGATGGGATGGGATG
TTGTTAAAAATATAAAAATCAAATGTGGAGTATTGTAA

Upstream 100 bases:

>100_bases
ATATTGTATGCGGTGGCGCAGATGATACAGATGGTGGGGAGGGAATGAATCTATATGTTCACTCTCGAAGCAGTAACCAA
TACGAAGGAAAGGAACTAAA

Downstream 100 bases:

>100_bases
TATGAAGATACTAAGAGTTTCAAGCGATCTATATCCGGCATTTGTGGGGGGCATTGCTCTTCATGTCCATGAACTTTCAG
TTATGCAATCAAAGATGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: Amine Oxidase Flavin-Containing Superfamily; Amine Oxidase Flavin-Containing; Flavin Containing Amine Oxidoreductase; FAD Dependent Oxidoreductase; Oxidoreductase; Glycosyl Transferase Family 2 Protein; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; FAD-Dependent Oxidoreductase; UDP-Galactopyranose Mutase; Protoporphyrinogen Oxidase-Like Protein; Oxidase

Number of amino acids: Translated: 465; Mature: 464

Protein sequence:

>465_residues
MAKQCDVLILGAGPAGLTAGYKLAEAGVSICIVDKQEHVGGLAKTLRHGDCLLDIGPHILCSREYVYDFNPEMYTFIKAL
LQEDIYEYESEHRKYLESMQVGQVRYKYPVSIMNALINAGLGKSMHIGWDYLRAKSSKKSNSNDYETSLVSSLGQSLAEL
FLLNIGEKTWGVPCGAMSQDVAWRVGEFSMLDVFKKQFSTMIASLQKKGDPVNYPKHGIGEICDRLKQEIDAKNICDWFL
SATPSNILVENGSVVSVDVVCSDGNVETIYPKHLISSIPMPYLLSAMRPFPPEDVQAAGQSLRCRCHICVYLVFSVDSIL
KEHCIYFADPKIPFSRMMEQKHYSDMMISDGKTVLAIEYFSWIEGGIWSMKDQELYDLTVEWLKRLSIIQNQDIIDYFIN
RETDAYPAYELGYRQHLEKVMSYLDGITNLDVIGRTGSFTYIGQYKAMQMGWDVVKNIKIKCGVL

Sequences:

>Translated_465_residues
MAKQCDVLILGAGPAGLTAGYKLAEAGVSICIVDKQEHVGGLAKTLRHGDCLLDIGPHILCSREYVYDFNPEMYTFIKAL
LQEDIYEYESEHRKYLESMQVGQVRYKYPVSIMNALINAGLGKSMHIGWDYLRAKSSKKSNSNDYETSLVSSLGQSLAEL
FLLNIGEKTWGVPCGAMSQDVAWRVGEFSMLDVFKKQFSTMIASLQKKGDPVNYPKHGIGEICDRLKQEIDAKNICDWFL
SATPSNILVENGSVVSVDVVCSDGNVETIYPKHLISSIPMPYLLSAMRPFPPEDVQAAGQSLRCRCHICVYLVFSVDSIL
KEHCIYFADPKIPFSRMMEQKHYSDMMISDGKTVLAIEYFSWIEGGIWSMKDQELYDLTVEWLKRLSIIQNQDIIDYFIN
RETDAYPAYELGYRQHLEKVMSYLDGITNLDVIGRTGSFTYIGQYKAMQMGWDVVKNIKIKCGVL
>Mature_464_residues
AKQCDVLILGAGPAGLTAGYKLAEAGVSICIVDKQEHVGGLAKTLRHGDCLLDIGPHILCSREYVYDFNPEMYTFIKALL
QEDIYEYESEHRKYLESMQVGQVRYKYPVSIMNALINAGLGKSMHIGWDYLRAKSSKKSNSNDYETSLVSSLGQSLAELF
LLNIGEKTWGVPCGAMSQDVAWRVGEFSMLDVFKKQFSTMIASLQKKGDPVNYPKHGIGEICDRLKQEIDAKNICDWFLS
ATPSNILVENGSVVSVDVVCSDGNVETIYPKHLISSIPMPYLLSAMRPFPPEDVQAAGQSLRCRCHICVYLVFSVDSILK
EHCIYFADPKIPFSRMMEQKHYSDMMISDGKTVLAIEYFSWIEGGIWSMKDQELYDLTVEWLKRLSIIQNQDIIDYFINR
ETDAYPAYELGYRQHLEKVMSYLDGITNLDVIGRTGSFTYIGQYKAMQMGWDVVKNIKIKCGVL

Specific function: Unknown

COG id: COG1232

COG function: function code H; Protoporphyrinogen oxidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52538; Mature: 52407

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKQCDVLILGAGPAGLTAGYKLAEAGVSICIVDKQEHVGGLAKTLRHGDCLLDIGPHIL
CCCCCCEEEECCCCCCCHHCCHHHHCCCEEEEECCHHHHHHHHHHHHCCCEEEECCCCEE
CSREYVYDFNPEMYTFIKALLQEDIYEYESEHRKYLESMQVGQVRYKYPVSIMNALINAG
ECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHCC
LGKSMHIGWDYLRAKSSKKSNSNDYETSLVSSLGQSLAELFLLNIGEKTWGVPCGAMSQD
CCCCEECCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCC
VAWRVGEFSMLDVFKKQFSTMIASLQKKGDPVNYPKHGIGEICDRLKQEIDAKNICDWFL
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH
SATPSNILVENGSVVSVDVVCSDGNVETIYPKHLISSIPMPYLLSAMRPFPPEDVQAAGQ
HCCCCCEEEECCCEEEEEEEECCCCEEEECHHHHHHHCCHHHHHHHHCCCCCHHHHHCCH
SLRCRCHICVYLVFSVDSILKEHCIYFADPKIPFSRMMEQKHYSDMMISDGKTVLAIEYF
HCEEHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHCCCEECCCCEEEEEEHH
SWIEGGIWSMKDQELYDLTVEWLKRLSIIQNQDIIDYFINRETDAYPAYELGYRQHLEKV
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHH
MSYLDGITNLDVIGRTGSFTYIGQYKAMQMGWDVVKNIKIKCGVL
HHHHCCCCCCEEECCCCCEEEEECHHHHHHHHHHHHCCCEEECCC
>Mature Secondary Structure 
AKQCDVLILGAGPAGLTAGYKLAEAGVSICIVDKQEHVGGLAKTLRHGDCLLDIGPHIL
CCCCCEEEECCCCCCCHHCCHHHHCCCEEEEECCHHHHHHHHHHHHCCCEEEECCCCEE
CSREYVYDFNPEMYTFIKALLQEDIYEYESEHRKYLESMQVGQVRYKYPVSIMNALINAG
ECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHCC
LGKSMHIGWDYLRAKSSKKSNSNDYETSLVSSLGQSLAELFLLNIGEKTWGVPCGAMSQD
CCCCEECCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCC
VAWRVGEFSMLDVFKKQFSTMIASLQKKGDPVNYPKHGIGEICDRLKQEIDAKNICDWFL
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH
SATPSNILVENGSVVSVDVVCSDGNVETIYPKHLISSIPMPYLLSAMRPFPPEDVQAAGQ
HCCCCCEEEECCCEEEEEEEECCCCEEEECHHHHHHHCCHHHHHHHHCCCCCHHHHHCCH
SLRCRCHICVYLVFSVDSILKEHCIYFADPKIPFSRMMEQKHYSDMMISDGKTVLAIEYF
HCEEHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHCCCEECCCCEEEEEEHH
SWIEGGIWSMKDQELYDLTVEWLKRLSIIQNQDIIDYFINRETDAYPAYELGYRQHLEKV
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHH
MSYLDGITNLDVIGRTGSFTYIGQYKAMQMGWDVVKNIKIKCGVL
HHHHCCCCCCEEECCCCCEEEEECHHHHHHHHHHHHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA