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The map label for this gene is ybfF [C]

Identifier: 124485725

GI number: 124485725

Start: 895653

End: 896528

Strand: Reverse

Name: ybfF [C]

Synonym: Mlab_0903

Alternate gene names: 124485725

Gene position: 896528-895653 (Counterclockwise)

Preceding gene: 124485733

Following gene: 124485724

Centisome position: 49.67

GC content: 53.31

Gene sequence:

>876_bases
ATGCCGGCATACAACGAACAGGAGCGTGTGGGCGCCACTGTTGCTGCTGTCAAGCCGTTTGCCGACGTGGTCGTGGTGGT
GGATGACGGATCGAAGGACAATACAATCACAGCAGCCGAAGATGCTGGTGCGGTTGTTATTCGTCACCGGATCAATCAGG
GCTACGGCGGGGCTCTTCGGACGATATTCCTCACTGCACAAAAGTACAAGCCGGATATCCTGATCATCATCGACGCCGAC
GGTCAGCACGACCCAAAGGACGTCCCCAGATTCGTTGAAAAGATCATGGAGGGGTATGATGTTGTCATCGGTTCACGGTT
CCTGGAGAAGACAAGTGCGGATATGGTTCCCGGTTACCGGAAGTTTGGGATGAAAGTTCTCGACCGTGCGACGATGATTG
CAGCCGGGAACATCCGTGTGAGCGATTCGCAGTGCGGCTACCGGGCATATGCGAAGAGTGCGTATATGGTGATCCATCCT
TCGGGAAAAGGAATGTCTGCCGGCTCCGAGATCCTTGTGCAGATGAGCGATCACCGTCTGAAGGTCGGCGAGATTCCAAT
TAAAGTGCGGTATGATATCGACGGCACGAGTTCCCAGAATCCGTTTAGGCATGGGCTCACGGTTCTGATGAATGTGGTCC
GTTTTGTCACGATTCGACGACCGGTGGCGGCGTTCGGGATACCTGGAGTGATAATTTTGGGGATTGGTGTTTTCCTAGCG
TTTCAGGCTCTGGATATCTCTGCAAAGACTGGGTTTTGGTCCCCAACGATTACGCTTGTCTCGATGATGCTCTTGATGAT
GGGGATGCTGCTGATTACAACAGCGCTGATATTGTATGCGGTGGCGCAGATGATACAGATGGTGGGGAGGGAATGA

Upstream 100 bases:

>100_bases
ACACAATGGTGGTAGTGTGGCCAACAACAATACAACAACTTCACATTTTTCAATACCCGAACAAGAGCCGCTCTCAGATA
AGCCGTCTGTGATGGTTGCA

Downstream 100 bases:

>100_bases
ATCTATATGTTCACTCTCGAAGCAGTAACCAATACGAAGGAAAGGAACTAAAATGGCAAAACAGTGTGATGTTTTGATTC
TTGGTGCGGGCCCAGCGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MPAYNEQERVGATVAAVKPFADVVVVVDDGSKDNTITAAEDAGAVVIRHRINQGYGGALRTIFLTAQKYKPDILIIIDAD
GQHDPKDVPRFVEKIMEGYDVVIGSRFLEKTSADMVPGYRKFGMKVLDRATMIAAGNIRVSDSQCGYRAYAKSAYMVIHP
SGKGMSAGSEILVQMSDHRLKVGEIPIKVRYDIDGTSSQNPFRHGLTVLMNVVRFVTIRRPVAAFGIPGVIILGIGVFLA
FQALDISAKTGFWSPTITLVSMMLLMMGMLLITTALILYAVAQMIQMVGRE

Sequences:

>Translated_291_residues
MPAYNEQERVGATVAAVKPFADVVVVVDDGSKDNTITAAEDAGAVVIRHRINQGYGGALRTIFLTAQKYKPDILIIIDAD
GQHDPKDVPRFVEKIMEGYDVVIGSRFLEKTSADMVPGYRKFGMKVLDRATMIAAGNIRVSDSQCGYRAYAKSAYMVIHP
SGKGMSAGSEILVQMSDHRLKVGEIPIKVRYDIDGTSSQNPFRHGLTVLMNVVRFVTIRRPVAAFGIPGVIILGIGVFLA
FQALDISAKTGFWSPTITLVSMMLLMMGMLLITTALILYAVAQMIQMVGRE
>Mature_290_residues
PAYNEQERVGATVAAVKPFADVVVVVDDGSKDNTITAAEDAGAVVIRHRINQGYGGALRTIFLTAQKYKPDILIIIDADG
QHDPKDVPRFVEKIMEGYDVVIGSRFLEKTSADMVPGYRKFGMKVLDRATMIAAGNIRVSDSQCGYRAYAKSAYMVIHPS
GKGMSAGSEILVQMSDHRLKVGEIPIKVRYDIDGTSSQNPFRHGLTVLMNVVRFVTIRRPVAAFGIPGVIILGIGVFLAF
QALDISAKTGFWSPTITLVSMMLLMMGMLLITTALILYAVAQMIQMVGRE

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788588, Length=162, Percent_Identity=29.6296296296296, Blast_Score=65, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24585265, Length=214, Percent_Identity=29.4392523364486, Blast_Score=69, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 31733; Mature: 31602

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAYNEQERVGATVAAVKPFADVVVVVDDGSKDNTITAAEDAGAVVIRHRINQGYGGALR
CCCCCCHHHHCHHHHHCCCCEEEEEEEECCCCCCEEEECCCCCEEEEEEHHCCCCCHHHH
TIFLTAQKYKPDILIIIDADGQHDPKDVPRFVEKIMEGYDVVIGSRFLEKTSADMVPGYR
HHEEEHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHH
KFGMKVLDRATMIAAGNIRVSDSQCGYRAYAKSAYMVIHPSGKGMSAGSEILVQMSDHRL
HHHHHHHHHHHEEEECCEEECCCCCCHHHHCCCEEEEEECCCCCCCCCCCEEEEECCCEE
KVGEIPIKVRYDIDGTSSQNPFRHGLTVLMNVVRFVTIRRPVAAFGIPGVIILGIGVFLA
EECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHH
FQALDISAKTGFWSPTITLVSMMLLMMGMLLITTALILYAVAQMIQMVGRE
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PAYNEQERVGATVAAVKPFADVVVVVDDGSKDNTITAAEDAGAVVIRHRINQGYGGALR
CCCCCHHHHCHHHHHCCCCEEEEEEEECCCCCCEEEECCCCCEEEEEEHHCCCCCHHHH
TIFLTAQKYKPDILIIIDADGQHDPKDVPRFVEKIMEGYDVVIGSRFLEKTSADMVPGYR
HHEEEHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHH
KFGMKVLDRATMIAAGNIRVSDSQCGYRAYAKSAYMVIHPSGKGMSAGSEILVQMSDHRL
HHHHHHHHHHHEEEECCEEECCCCCCHHHHCCCEEEEEECCCCCCCCCCCEEEEECCCEE
KVGEIPIKVRYDIDGTSSQNPFRHGLTVLMNVVRFVTIRRPVAAFGIPGVIILGIGVFLA
EECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHH
FQALDISAKTGFWSPTITLVSMMLLMMGMLLITTALILYAVAQMIQMVGRE
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]