| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485708
Identifier: 124485708
GI number: 124485708
Start: 874206
End: 874595
Strand: Reverse
Name: 124485708
Synonym: Mlab_0886
Alternate gene names: NA
Gene position: 874595-874206 (Counterclockwise)
Preceding gene: 124485713
Following gene: 124485707
Centisome position: 48.46
GC content: 48.21
Gene sequence:
>390_bases ATGCCTGAGGCAGGCAAAACCTCATTACCATCCACCGACAAAGTACCATATACCTGTATCATGTCCGAATACGCAAGCAT CAAAAAGGAGGTACTCACGAAATTAGAGGCAAACCTTCCGGAGATACGCGAGCGTTTCGGCATTGAAACGATCGGAATCT TCGGCTCCGTGAGTCGGGAAGAAGACACGCCCGACTCAGATGTAGATGTATTGTATGCATTCAAAACAGGCGGGGTCCCT CTTCGGGAATTTTTCGCCTTCAAACAGTATCTGGAAGATCTGTTTGGAAGAACGGTCGATTTAGTTCCCGTACGATGGCT GGCACCGTCACTTCGCCCCTACATAGAACGCGATATGATACTGTTTGAAGCAAATAAGGCAGAGGCATGA
Upstream 100 bases:
>100_bases CCTGAATTCTGCAGGAGATGCACGTAAAAAAATCGTAGTATCTTTCATCTTTGATCAAACACGTTTGTACATAGTTTATT ATTTCCATTAAAAGTATGCC
Downstream 100 bases:
>100_bases AATCCGAGTATATCTATCTGGACCACATGCTTCAGCGCTGTGAAAAAATACGAAAAATTACCAGTTCGGTCAAAAAAGAG GCATTCTTTCTGGATGAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: DNA Polymerase Beta Domain Protein Region; Nucleotidyltransferase Family Protein; DNA Polymerase Beta Domain-Containing Protein; Nucleotidyltransferase; DNA Polymerase Beta-Like Region; Nucleotidyltransferase Domain-Containing Protein; DNA Polymerase Subunit Beta
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MPEAGKTSLPSTDKVPYTCIMSEYASIKKEVLTKLEANLPEIRERFGIETIGIFGSVSREEDTPDSDVDVLYAFKTGGVP LREFFAFKQYLEDLFGRTVDLVPVRWLAPSLRPYIERDMILFEANKAEA
Sequences:
>Translated_129_residues MPEAGKTSLPSTDKVPYTCIMSEYASIKKEVLTKLEANLPEIRERFGIETIGIFGSVSREEDTPDSDVDVLYAFKTGGVP LREFFAFKQYLEDLFGRTVDLVPVRWLAPSLRPYIERDMILFEANKAEA >Mature_128_residues PEAGKTSLPSTDKVPYTCIMSEYASIKKEVLTKLEANLPEIRERFGIETIGIFGSVSREEDTPDSDVDVLYAFKTGGVPL REFFAFKQYLEDLFGRTVDLVPVRWLAPSLRPYIERDMILFEANKAEA
Specific function: Unknown
COG id: COG1669
COG function: function code R; Predicted nucleotidyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14628; Mature: 14497
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEAGKTSLPSTDKVPYTCIMSEYASIKKEVLTKLEANLPEIRERFGIETIGIFGSVSRE CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHCCCCCCC EDTPDSDVDVLYAFKTGGVPLREFFAFKQYLEDLFGRTVDLVPVRWLAPSLRPYIERDMI CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEECHHHHHCCHHHHHHHHCEE LFEANKAEA EEECCCCCC >Mature Secondary Structure PEAGKTSLPSTDKVPYTCIMSEYASIKKEVLTKLEANLPEIRERFGIETIGIFGSVSRE CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHCCCCCCC EDTPDSDVDVLYAFKTGGVPLREFFAFKQYLEDLFGRTVDLVPVRWLAPSLRPYIERDMI CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEECHHHHHCCHHHHHHHHCEE LFEANKAEA EEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA