| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485704
Identifier: 124485704
GI number: 124485704
Start: 871506
End: 871772
Strand: Reverse
Name: 124485704
Synonym: Mlab_0882
Alternate gene names: NA
Gene position: 871772-871506 (Counterclockwise)
Preceding gene: 124485705
Following gene: 124485703
Centisome position: 48.3
GC content: 52.43
Gene sequence:
>267_bases ATGGCTCCCGCGAAAACCCAGACCGCAGCACTCATCCTGACAGCATGGATGGGCACAGTAGCCGCGATCATGATCCTCGC ACGAACCATCAATATCGAGATCTTTTTTGTACTCTGGCTCATCGGCTTTTTGATAATCACCGAGTTCTTCGTTGTCACCA CCCTTCGGCCGAAAAGTGCACGCTGGCAGCGCCTGATTGGGATCGCCGGCGTCGGCATCTTTGCCGTCATCATCATCATG AAAATCGTGGAGATCATCGCAAAATGA
Upstream 100 bases:
>100_bases AGTTTTCTTCGAAAACTTGCTCAGCTGAGCTCATCGACGCAGTCGATGAGCCGCAAACCAAAATCTATTACCCTAAATAC ACCAAATCAATACATTATCT
Downstream 100 bases:
>100_bases GGCAAAACCTCGCTGCAGCTGCCGCAATACTTGCCGTCATCGCTGTAGTAATGCTTGCAGCACTGCTTGCCGGAAGCGGC ACGCTTCTCTACGCTGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MAPAKTQTAALILTAWMGTVAAIMILARTINIEIFFVLWLIGFLIITEFFVVTTLRPKSARWQRLIGIAGVGIFAVIIIM KIVEIIAK
Sequences:
>Translated_88_residues MAPAKTQTAALILTAWMGTVAAIMILARTINIEIFFVLWLIGFLIITEFFVVTTLRPKSARWQRLIGIAGVGIFAVIIIM KIVEIIAK >Mature_87_residues APAKTQTAALILTAWMGTVAAIMILARTINIEIFFVLWLIGFLIITEFFVVTTLRPKSARWQRLIGIAGVGIFAVIIIMK IVEIIAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9744; Mature: 9613
Theoretical pI: Translated: 11.65; Mature: 11.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPAKTQTAALILTAWMGTVAAIMILARTINIEIFFVLWLIGFLIITEFFVVTTLRPKSA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH RWQRLIGIAGVGIFAVIIIMKIVEIIAK HHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure APAKTQTAALILTAWMGTVAAIMILARTINIEIFFVLWLIGFLIITEFFVVTTLRPKSA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH RWQRLIGIAGVGIFAVIIIMKIVEIIAK HHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA