| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485687
Identifier: 124485687
GI number: 124485687
Start: 855735
End: 856211
Strand: Reverse
Name: 124485687
Synonym: Mlab_0865
Alternate gene names: NA
Gene position: 856211-855735 (Counterclockwise)
Preceding gene: 124485688
Following gene: 124485686
Centisome position: 47.44
GC content: 54.72
Gene sequence:
>477_bases ATGGGATTTTTAGGCAATATCGAACGGGCACTCGGTGTGTGGTATCCGGACAAAGACACGGAACCCGATGACGGCAACCC TCTGGTAGCTCTGGCGTTTCGCGATTACGTGATCAAACGGCTTGGAAGCACATGGTCGGCGACCGGCCGCGAGGAGAGAA GCCCGGGCGAACCGGATCTTCTCGCCCTTAGAAATGCCGACGAGAAACGCTATGATCTGGTCACCTGCTACCGGAGCCGT ATGTTTGTCGGGGAAGACGGCGAGGCCTACCTGCCCTGGACAACCCAGGAGATCTACGAAAAATATCTCGCGTATGCAGC AGCCGAAGGAAATCCCTTTTACGTCATCTTCGGTCTGCACGGATTTGCCGATGCGCCGAAGTTCTTGTTCGCCGTCCCTC TTGATAAGGCGGTCATCGATCTGAAGAAAAGCGTTCTTCAGCAGTATGAAGTCCCTGAAAGCCGGGAACTTCTGTAA
Upstream 100 bases:
>100_bases GAGAGCGTATAATGACAGTTGTCTTTCTGAAAGACTTCGCAGGGACGAGACCCTCTTCACGGAATGTGCGGAGCAGTATC TCCACATCAACTGATCTGAC
Downstream 100 bases:
>100_bases CGTTCTTTTTTTGCGCGGTCATGCGCCTGTTTCGTGAGCCGGTTTCAAAAGCCGTGGAATAAAGCGTTTTTGGCGGCTTT TTTCACTCTCTCCCAGAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MGFLGNIERALGVWYPDKDTEPDDGNPLVALAFRDYVIKRLGSTWSATGREERSPGEPDLLALRNADEKRYDLVTCYRSR MFVGEDGEAYLPWTTQEIYEKYLAYAAAEGNPFYVIFGLHGFADAPKFLFAVPLDKAVIDLKKSVLQQYEVPESRELL
Sequences:
>Translated_158_residues MGFLGNIERALGVWYPDKDTEPDDGNPLVALAFRDYVIKRLGSTWSATGREERSPGEPDLLALRNADEKRYDLVTCYRSR MFVGEDGEAYLPWTTQEIYEKYLAYAAAEGNPFYVIFGLHGFADAPKFLFAVPLDKAVIDLKKSVLQQYEVPESRELL >Mature_157_residues GFLGNIERALGVWYPDKDTEPDDGNPLVALAFRDYVIKRLGSTWSATGREERSPGEPDLLALRNADEKRYDLVTCYRSRM FVGEDGEAYLPWTTQEIYEKYLAYAAAEGNPFYVIFGLHGFADAPKFLFAVPLDKAVIDLKKSVLQQYEVPESRELL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17950; Mature: 17819
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFLGNIERALGVWYPDKDTEPDDGNPLVALAFRDYVIKRLGSTWSATGREERSPGEPDL CCCCCCHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCE LALRNADEKRYDLVTCYRSRMFVGEDGEAYLPWTTQEIYEKYLAYAAAEGNPFYVIFGLH EEECCCCCHHHHHHHHHHHHEEECCCCCEECCCCHHHHHHHHHHHHCCCCCCEEEEEECC GFADAPKFLFAVPLDKAVIDLKKSVLQQYEVPESRELL CCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure GFLGNIERALGVWYPDKDTEPDDGNPLVALAFRDYVIKRLGSTWSATGREERSPGEPDL CCCCCHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCE LALRNADEKRYDLVTCYRSRMFVGEDGEAYLPWTTQEIYEKYLAYAAAEGNPFYVIFGLH EEECCCCCHHHHHHHHHHHHEEECCCCCEECCCCHHHHHHHHHHHHCCCCCCEEEEEECC GFADAPKFLFAVPLDKAVIDLKKSVLQQYEVPESRELL CCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA