| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485681
Identifier: 124485681
GI number: 124485681
Start: 846749
End: 848530
Strand: Reverse
Name: 124485681
Synonym: Mlab_0859
Alternate gene names: NA
Gene position: 848530-846749 (Counterclockwise)
Preceding gene: 124485683
Following gene: 124485679
Centisome position: 47.01
GC content: 33.73
Gene sequence:
>1782_bases ATGATGATTAATAGTAATAATCTAAATATAAAGCAAGAAGCAGAAGAAACAATCGAAGATTACATACGAAATACCGTGGG TGATAATAAATTTGACAACCTCTCCATTCCAGTATTTCTCAGTTCCACGAAAGATGATCTTCAAAGTGAAAGATTTGCAA TAACTCTTCTCATTCAGCAGATGGGATTAATCCCAATTGCAATGGAAGAATTCGGAGCCAGACCTGAATCACCCTTGGAT ACATGTCTTGGAGAATTAGATGAAGCAAAAATATTTGTTTTAGTCATTGGGATGCGATATGGTTCGCCATATATCAGTGA TAACGGAAATAATGGTGAACTCAATGGAAAATCATATACAGAAATCGAATATGATAATGCATTAAAAAACGAAAAAATTC GTATTCTTGCTTATTGCATTGATGAAGAAAAGGCAGTGATACATCCAATATATGTTGATAAAGATGTTAATGCTAAAAAA CTCATCAAATTCAAAGCTAAAATCAAAAAGAATCATCATATTAAAAAATATGCCAATACACAGGAATTGGTTTCTGCAGT ATTCCATGACATATCATATCAGATTAAATTATTAACAAGAGATAGTAGCACTCCAATTTCATCACAGCAAACAGAAATAT TAAAGCAACTAACGATAGCTGGGAACACTGATAATCTCTATACTCATGAGACGCTTCAGATAAATGGAACGTCAACTTAT TTAGATAGTGATTCTGTTTACTTGTATCTCACGAAAAACGGGAGCACTAATACACCATTGACTCAAAATGAGTTTCTCCC TATTGGTAAGCATGGGGAAAAATTCCTTCAGATACCAGTTCTTAATGATTTTTCATGGGCGACCCTTTGGAATCCACGAG ATACATTCACTGATCGTGATGTGAGAAATAGATTGGTGCATGAAGGAGGGATATTAAAATTCATCGTTTCTCCTTATCCG ATTAACACACAACCATTTCATGATTATAAAACGTTCTTAATAACGCTAAAAACACCATTCCTTACCGCAACAAGCAATAC ATCACCTCTAATTCCAGGGGTTCAAACATATGTTCGGGGAAATGCACTAACAAAGCAGCCATCATTACTCGCTTGGTTAT GTACAAAAGATAAATTAATAGATTATTTTCCAATTTCCATCCAAAATGATGATTATATTTATACCTTCCCATATGAACTC TTAAAATCTCTTGAAGTAGGAATGACGTATTTATTAATTCTTCAGATGCCAAGTACATCTAAGTATGGAGATGTAAGACA ATTCTACTACTCACCGACTCAACATGGCATTGGGAAAGTAAGTACGGATAATTTGGACAAAATAGAATCTGAATCAATGA TACTGCTTGATGCAAACAATTCAACACCCGGAATTGTGGACAAAATATGCAATCTTATTGACTCTACAGAAAATGATATT TATGTGAGATTAGCCTTTGTTCGTCAGGATCCTGAAATAAATAATTTTATAATAAAGCAGAAAGCTGGTAAACTAGAAAT CTCGGGTCAAACAAATTTACCAATAGATACGCAACTTTCTGTAGAAATAACTACAAAGGAAATTCCACAAAGAGCAATAT TTGCATTTAATCAACTTCGTAACCCACGTATATTTTCCACAATGAAAGTAATTAGATCGGGGGGAAGGAATGGTTTTTCC GTTATTATTGCTACGCCAAGAATACTAGTAGGTGAATACACGGTAGTGTTAACTCTCTTAACAACTGGTAAAAAGGTATT TGAAAAGTCAATTAATTTATGA
Upstream 100 bases:
>100_bases AATTATTATCAAATTTTGATTCATAGCAAGTAGTTTTATCATATTTCCCAACCAAAATAGAAAATACAACTTCTCGCATT CAAGTTTTGACCAGTAAAAG
Downstream 100 bases:
>100_bases AGTGATTCTATAATCTTATTTTATAATGGATACGAGTGTGTCCAATATTCCTCGAATGCTTTCGTTGAATATGCTATGAA TAGTTATTCCATTTCCCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 593; Mature: 593
Protein sequence:
>593_residues MMINSNNLNIKQEAEETIEDYIRNTVGDNKFDNLSIPVFLSSTKDDLQSERFAITLLIQQMGLIPIAMEEFGARPESPLD TCLGELDEAKIFVLVIGMRYGSPYISDNGNNGELNGKSYTEIEYDNALKNEKIRILAYCIDEEKAVIHPIYVDKDVNAKK LIKFKAKIKKNHHIKKYANTQELVSAVFHDISYQIKLLTRDSSTPISSQQTEILKQLTIAGNTDNLYTHETLQINGTSTY LDSDSVYLYLTKNGSTNTPLTQNEFLPIGKHGEKFLQIPVLNDFSWATLWNPRDTFTDRDVRNRLVHEGGILKFIVSPYP INTQPFHDYKTFLITLKTPFLTATSNTSPLIPGVQTYVRGNALTKQPSLLAWLCTKDKLIDYFPISIQNDDYIYTFPYEL LKSLEVGMTYLLILQMPSTSKYGDVRQFYYSPTQHGIGKVSTDNLDKIESESMILLDANNSTPGIVDKICNLIDSTENDI YVRLAFVRQDPEINNFIIKQKAGKLEISGQTNLPIDTQLSVEITTKEIPQRAIFAFNQLRNPRIFSTMKVIRSGGRNGFS VIIATPRILVGEYTVVLTLLTTGKKVFEKSINL
Sequences:
>Translated_593_residues MMINSNNLNIKQEAEETIEDYIRNTVGDNKFDNLSIPVFLSSTKDDLQSERFAITLLIQQMGLIPIAMEEFGARPESPLD TCLGELDEAKIFVLVIGMRYGSPYISDNGNNGELNGKSYTEIEYDNALKNEKIRILAYCIDEEKAVIHPIYVDKDVNAKK LIKFKAKIKKNHHIKKYANTQELVSAVFHDISYQIKLLTRDSSTPISSQQTEILKQLTIAGNTDNLYTHETLQINGTSTY LDSDSVYLYLTKNGSTNTPLTQNEFLPIGKHGEKFLQIPVLNDFSWATLWNPRDTFTDRDVRNRLVHEGGILKFIVSPYP INTQPFHDYKTFLITLKTPFLTATSNTSPLIPGVQTYVRGNALTKQPSLLAWLCTKDKLIDYFPISIQNDDYIYTFPYEL LKSLEVGMTYLLILQMPSTSKYGDVRQFYYSPTQHGIGKVSTDNLDKIESESMILLDANNSTPGIVDKICNLIDSTENDI YVRLAFVRQDPEINNFIIKQKAGKLEISGQTNLPIDTQLSVEITTKEIPQRAIFAFNQLRNPRIFSTMKVIRSGGRNGFS VIIATPRILVGEYTVVLTLLTTGKKVFEKSINL >Mature_593_residues MMINSNNLNIKQEAEETIEDYIRNTVGDNKFDNLSIPVFLSSTKDDLQSERFAITLLIQQMGLIPIAMEEFGARPESPLD TCLGELDEAKIFVLVIGMRYGSPYISDNGNNGELNGKSYTEIEYDNALKNEKIRILAYCIDEEKAVIHPIYVDKDVNAKK LIKFKAKIKKNHHIKKYANTQELVSAVFHDISYQIKLLTRDSSTPISSQQTEILKQLTIAGNTDNLYTHETLQINGTSTY LDSDSVYLYLTKNGSTNTPLTQNEFLPIGKHGEKFLQIPVLNDFSWATLWNPRDTFTDRDVRNRLVHEGGILKFIVSPYP INTQPFHDYKTFLITLKTPFLTATSNTSPLIPGVQTYVRGNALTKQPSLLAWLCTKDKLIDYFPISIQNDDYIYTFPYEL LKSLEVGMTYLLILQMPSTSKYGDVRQFYYSPTQHGIGKVSTDNLDKIESESMILLDANNSTPGIVDKICNLIDSTENDI YVRLAFVRQDPEINNFIIKQKAGKLEISGQTNLPIDTQLSVEITTKEIPQRAIFAFNQLRNPRIFSTMKVIRSGGRNGFS VIIATPRILVGEYTVVLTLLTTGKKVFEKSINL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67176; Mature: 67176
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMINSNNLNIKQEAEETIEDYIRNTVGDNKFDNLSIPVFLSSTKDDLQSERFAITLLIQQ CEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHEEEEEEHHH MGLIPIAMEEFGARPESPLDTCLGELDEAKIFVLVIGMRYGSPYISDNGNNGELNGKSYT HCCCEEEHHHHCCCCCCHHHHHHCCCCCCEEEEEEEEEECCCCEECCCCCCCCCCCCEEE EIEYDNALKNEKIRILAYCIDEEKAVIHPIYVDKDVNAKKLIKFKAKIKKNHHIKKYANT EEECCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHCCH QELVSAVFHDISYQIKLLTRDSSTPISSQQTEILKQLTIAGNTDNLYTHETLQINGTSTY HHHHHHHHHCCEEEEEEEEECCCCCCCHHHHHHHHHHEECCCCCCEEEEEEEEECCCEEE LDSDSVYLYLTKNGSTNTPLTQNEFLPIGKHGEKFLQIPVLNDFSWATLWNPRDTFTDRD ECCCCEEEEEECCCCCCCCCCCCCCEECCCCCCEEEEEEEECCCCEEEECCCCCCCCCHH VRNRLVHEGGILKFIVSPYPINTQPFHDYKTFLITLKTPFLTATSNTSPLIPGVQTYVRG HHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCEEEECCCCCCCCCCHHHHHCC NALTKQPSLLAWLCTKDKLIDYFPISIQNDDYIYTFPYELLKSLEVGMTYLLILQMPSTS CCCCCCCCEEEEEECCCCEEEEEEEEECCCCEEEECHHHHHHHHHHCCEEEEEEECCCCC KYGDVRQFYYSPTQHGIGKVSTDNLDKIESESMILLDANNSTPGIVDKICNLIDSTENDI CCCCHHHHEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCE YVRLAFVRQDPEINNFIIKQKAGKLEISGQTNLPIDTQLSVEITTKEIPQRAIFAFNQLR EEEEEEEECCCCCCCEEEEECCCEEEECCCCCCCCCCEEEEEEEHHHCCHHHHHHHHHCC NPRIFSTMKVIRSGGRNGFSVIIATPRILVGEYTVVLTLLTTGKKVFEKSINL CCHHHHHHHHHHCCCCCCEEEEEECCCEEECCEEEEEEEHHCCHHHHHHHCCC >Mature Secondary Structure MMINSNNLNIKQEAEETIEDYIRNTVGDNKFDNLSIPVFLSSTKDDLQSERFAITLLIQQ CEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHEEEEEEHHH MGLIPIAMEEFGARPESPLDTCLGELDEAKIFVLVIGMRYGSPYISDNGNNGELNGKSYT HCCCEEEHHHHCCCCCCHHHHHHCCCCCCEEEEEEEEEECCCCEECCCCCCCCCCCCEEE EIEYDNALKNEKIRILAYCIDEEKAVIHPIYVDKDVNAKKLIKFKAKIKKNHHIKKYANT EEECCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHCCH QELVSAVFHDISYQIKLLTRDSSTPISSQQTEILKQLTIAGNTDNLYTHETLQINGTSTY HHHHHHHHHCCEEEEEEEEECCCCCCCHHHHHHHHHHEECCCCCCEEEEEEEEECCCEEE LDSDSVYLYLTKNGSTNTPLTQNEFLPIGKHGEKFLQIPVLNDFSWATLWNPRDTFTDRD ECCCCEEEEEECCCCCCCCCCCCCCEECCCCCCEEEEEEEECCCCEEEECCCCCCCCCHH VRNRLVHEGGILKFIVSPYPINTQPFHDYKTFLITLKTPFLTATSNTSPLIPGVQTYVRG HHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCEEEECCCCCCCCCCHHHHHCC NALTKQPSLLAWLCTKDKLIDYFPISIQNDDYIYTFPYELLKSLEVGMTYLLILQMPSTS CCCCCCCCEEEEEECCCCEEEEEEEEECCCCEEEECHHHHHHHHHHCCEEEEEEECCCCC KYGDVRQFYYSPTQHGIGKVSTDNLDKIESESMILLDANNSTPGIVDKICNLIDSTENDI CCCCHHHHEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCE YVRLAFVRQDPEINNFIIKQKAGKLEISGQTNLPIDTQLSVEITTKEIPQRAIFAFNQLR EEEEEEEECCCCCCCEEEEECCCEEEECCCCCCCCCCEEEEEEEHHHCCHHHHHHHHHCC NPRIFSTMKVIRSGGRNGFSVIIATPRILVGEYTVVLTLLTTGKKVFEKSINL CCHHHHHHHHHHCCCCCCEEEEEECCCEEECCEEEEEEEHHCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA