| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is ywbE [H]
Identifier: 124485683
GI number: 124485683
Start: 850145
End: 850339
Strand: Reverse
Name: ywbE [H]
Synonym: Mlab_0861
Alternate gene names: 124485683
Gene position: 850339-850145 (Counterclockwise)
Preceding gene: 124485686
Following gene: 124485681
Centisome position: 47.11
GC content: 54.36
Gene sequence:
>195_bases ATGAAAAAGGGAAATCTGCGCAGTAATATTCATCCGGGAGATGCGGTGGCAATAATCCTGAAAAAAGATCAGCCGACGGG TGCGCTTACGTTCGGGCGGGTCGCAGAGATCCTGACAAACTCACAAACCCACCCCCACGGGATAAAAGTCAGGCTCACCG ACGGATCGGTCGGCCGGGTGCAGGAGATCTACTGA
Upstream 100 bases:
>100_bases TCCCGATTCCTGACCATAACTGAAAAAAAGCCGGATCATTCGTTTCTTCTGCCCGGATACGATCCTTTTTATCTCAGACG TCCAACCAGTATCCAAGATC
Downstream 100 bases:
>100_bases CGTCTCAAAACAGCGATCATATCGCCTTTTTTTGCCCCAATATCCCTGCCGACCGCGTCGCATTTCACCATCATCAGGTA GGCAACCGGCGGCCGGACCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 64
Protein sequence:
>64_residues MKKGNLRSNIHPGDAVAIILKKDQPTGALTFGRVAEILTNSQTHPHGIKVRLTDGSVGRVQEIY
Sequences:
>Translated_64_residues MKKGNLRSNIHPGDAVAIILKKDQPTGALTFGRVAEILTNSQTHPHGIKVRLTDGSVGRVQEIY >Mature_64_residues MKKGNLRSNIHPGDAVAIILKKDQPTGALTFGRVAEILTNSQTHPHGIKVRLTDGSVGRVQEIY
Specific function: Unknown
COG id: COG4895
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019240 [H]
Pfam domain/function: PF09962 DUF2196 [H]
EC number: NA
Molecular weight: Translated: 6949; Mature: 6949
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKGNLRSNIHPGDAVAIILKKDQPTGALTFGRVAEILTNSQTHPHGIKVRLTDGSVGRV CCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCE QEIY EECC >Mature Secondary Structure MKKGNLRSNIHPGDAVAIILKKDQPTGALTFGRVAEILTNSQTHPHGIKVRLTDGSVGRV CCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCE QEIY EECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377 [H]