Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is ywbE [H]

Identifier: 124485683

GI number: 124485683

Start: 850145

End: 850339

Strand: Reverse

Name: ywbE [H]

Synonym: Mlab_0861

Alternate gene names: 124485683

Gene position: 850339-850145 (Counterclockwise)

Preceding gene: 124485686

Following gene: 124485681

Centisome position: 47.11

GC content: 54.36

Gene sequence:

>195_bases
ATGAAAAAGGGAAATCTGCGCAGTAATATTCATCCGGGAGATGCGGTGGCAATAATCCTGAAAAAAGATCAGCCGACGGG
TGCGCTTACGTTCGGGCGGGTCGCAGAGATCCTGACAAACTCACAAACCCACCCCCACGGGATAAAAGTCAGGCTCACCG
ACGGATCGGTCGGCCGGGTGCAGGAGATCTACTGA

Upstream 100 bases:

>100_bases
TCCCGATTCCTGACCATAACTGAAAAAAAGCCGGATCATTCGTTTCTTCTGCCCGGATACGATCCTTTTTATCTCAGACG
TCCAACCAGTATCCAAGATC

Downstream 100 bases:

>100_bases
CGTCTCAAAACAGCGATCATATCGCCTTTTTTTGCCCCAATATCCCTGCCGACCGCGTCGCATTTCACCATCATCAGGTA
GGCAACCGGCGGCCGGACCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 64; Mature: 64

Protein sequence:

>64_residues
MKKGNLRSNIHPGDAVAIILKKDQPTGALTFGRVAEILTNSQTHPHGIKVRLTDGSVGRVQEIY

Sequences:

>Translated_64_residues
MKKGNLRSNIHPGDAVAIILKKDQPTGALTFGRVAEILTNSQTHPHGIKVRLTDGSVGRVQEIY
>Mature_64_residues
MKKGNLRSNIHPGDAVAIILKKDQPTGALTFGRVAEILTNSQTHPHGIKVRLTDGSVGRVQEIY

Specific function: Unknown

COG id: COG4895

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019240 [H]

Pfam domain/function: PF09962 DUF2196 [H]

EC number: NA

Molecular weight: Translated: 6949; Mature: 6949

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKGNLRSNIHPGDAVAIILKKDQPTGALTFGRVAEILTNSQTHPHGIKVRLTDGSVGRV
CCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCE
QEIY
EECC
>Mature Secondary Structure
MKKGNLRSNIHPGDAVAIILKKDQPTGALTFGRVAEILTNSQTHPHGIKVRLTDGSVGRV
CCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCE
QEIY
EECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]