| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485337
Identifier: 124485337
GI number: 124485337
Start: 486132
End: 486887
Strand: Reverse
Name: 124485337
Synonym: Mlab_0512
Alternate gene names: NA
Gene position: 486887-486132 (Counterclockwise)
Preceding gene: 124485338
Following gene: 124485336
Centisome position: 26.97
GC content: 57.41
Gene sequence:
>756_bases ATGCAGCCGGAATTTTATGCAGAAGGACCCGCCGTCCTCATCGAAAGGCAGGAGCGTTCCCTGATAATAGCCGATCCCCA CTTCGGCGTCGAGGCCGACCTCCACCGGCATGGTCTGCATTTCCAGAGTGCCACCGACTCACGTCTCGCAAGACTGCTTG CCGTCATCGAACAGGCCGATCCCGACTATTTGATCGTGCTTGGCGACCTCAAGCACATGATCCCGTACGTCACCTACCAG GAACGAACCGAGATGCCCGAGGTCCTCAGAAAGATCCGGAGAGAAACCGAATTCCGGCTCGCTCCAGGGAATCACGACAC CGGGCTTGAACATTATCTCGAAAAGGGCGAGCTTCTTCCGATGAACGGGGCTTTGATCGACGGAACCGGCTATTTTCACG GCCACACGATCCCGGATCCAGCTCTCCTCGGTCATTTGATTTTGTGCGGCCATCATCATCCGGTCGTGAACATCTACGAC ACCGTCGGATGTGCTCTTCGCGGAACGCCGGGGTATCTTCTTGCCGAGATCGACCCCTCCGTATGGGGCCCGGTACCGGC CGACCCGACCCGGGTTCTACTGGTCCCGGCGTTTTATGAACTGGCAGGGGGGATGGATGTCCGGCTGATCCCGGGCAACA AAATCTCTCCGATCGCAAAAGCGATTTTGACCGAAACGGGTGAGGTGTTCTTAAAAGACGGGACTTACGTTGCTCCGTTC ACAGAACTCCGCCCCGATCCTCTGGAGGGAGTATGA
Upstream 100 bases:
>100_bases TCGGTCTTGACGAATCTTCGGCGAAGATGCGTCTTGGAATCCTTATGGAAGAAGGGGAATGCTACACCCCGACGACCGAA TTCATCAAAATCGCCTGACC
Downstream 100 bases:
>100_bases CATCCGCGATTCAGGAACTCAAAGACTCGCTTCACCCAAAGCTTCGGGCGGTTCTGGAAAAGCGAGGCTTCGACGAGTTT TCAGAAATCCAGATGCGTGC
Product: putative phosphoesterase
Products: NA
Alternate protein names: Phosphoesterase; Rpa-Associated Phosphoesterase; Calcineurin Superfamily Phosphoesterase
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MQPEFYAEGPAVLIERQERSLIIADPHFGVEADLHRHGLHFQSATDSRLARLLAVIEQADPDYLIVLGDLKHMIPYVTYQ ERTEMPEVLRKIRRETEFRLAPGNHDTGLEHYLEKGELLPMNGALIDGTGYFHGHTIPDPALLGHLILCGHHHPVVNIYD TVGCALRGTPGYLLAEIDPSVWGPVPADPTRVLLVPAFYELAGGMDVRLIPGNKISPIAKAILTETGEVFLKDGTYVAPF TELRPDPLEGV
Sequences:
>Translated_251_residues MQPEFYAEGPAVLIERQERSLIIADPHFGVEADLHRHGLHFQSATDSRLARLLAVIEQADPDYLIVLGDLKHMIPYVTYQ ERTEMPEVLRKIRRETEFRLAPGNHDTGLEHYLEKGELLPMNGALIDGTGYFHGHTIPDPALLGHLILCGHHHPVVNIYD TVGCALRGTPGYLLAEIDPSVWGPVPADPTRVLLVPAFYELAGGMDVRLIPGNKISPIAKAILTETGEVFLKDGTYVAPF TELRPDPLEGV >Mature_251_residues MQPEFYAEGPAVLIERQERSLIIADPHFGVEADLHRHGLHFQSATDSRLARLLAVIEQADPDYLIVLGDLKHMIPYVTYQ ERTEMPEVLRKIRRETEFRLAPGNHDTGLEHYLEKGELLPMNGALIDGTGYFHGHTIPDPALLGHLILCGHHHPVVNIYD TVGCALRGTPGYLLAEIDPSVWGPVPADPTRVLLVPAFYELAGGMDVRLIPGNKISPIAKAILTETGEVFLKDGTYVAPF TELRPDPLEGV
Specific function: Unknown
COG id: COG1407
COG function: function code R; Predicted ICC-like phosphoesterases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27787; Mature: 27787
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPEFYAEGPAVLIERQERSLIIADPHFGVEADLHRHGLHFQSATDSRLARLLAVIEQAD CCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCC PDYLIVLGDLKHMIPYVTYQERTEMPEVLRKIRRETEFRLAPGNHDTGLEHYLEKGELLP CCEEEEECCHHHHCCCEEHHHHCCHHHHHHHHHHCCCEEECCCCCCCHHHHHHHCCCEEE MNGALIDGTGYFHGHTIPDPALLGHLILCGHHHPVVNIYDTVGCALRGTPGYLLAEIDPS CCCEEECCCCEECCCCCCCHHHHHHHHEECCCCCEEEEECCCCEEEECCCCEEEEEECCC VWGPVPADPTRVLLVPAFYELAGGMDVRLIPGNKISPIAKAILTETGEVFLKDGTYVAPF CCCCCCCCCCEEEEEEEHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCEEEECCCEECCH TELRPDPLEGV HHCCCCCCCCC >Mature Secondary Structure MQPEFYAEGPAVLIERQERSLIIADPHFGVEADLHRHGLHFQSATDSRLARLLAVIEQAD CCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCC PDYLIVLGDLKHMIPYVTYQERTEMPEVLRKIRRETEFRLAPGNHDTGLEHYLEKGELLP CCEEEEECCHHHHCCCEEHHHHCCHHHHHHHHHHCCCEEECCCCCCCHHHHHHHCCCEEE MNGALIDGTGYFHGHTIPDPALLGHLILCGHHHPVVNIYDTVGCALRGTPGYLLAEIDPS CCCEEECCCCEECCCCCCCHHHHHHHHEECCCCCEEEEECCCCEEEECCCCEEEEEECCC VWGPVPADPTRVLLVPAFYELAGGMDVRLIPGNKISPIAKAILTETGEVFLKDGTYVAPF CCCCCCCCCCEEEEEEEHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCEEEECCCEECCH TELRPDPLEGV HHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA