Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124485338

Identifier: 124485338

GI number: 124485338

Start: 486890

End: 487588

Strand: Reverse

Name: 124485338

Synonym: Mlab_0513

Alternate gene names: NA

Gene position: 487588-486890 (Counterclockwise)

Preceding gene: 124485339

Following gene: 124485337

Centisome position: 27.01

GC content: 54.22

Gene sequence:

>699_bases
ATGGATACCCAAAATACCGGACTTCTCCCGGCATCCCGTATATTCGCCGGCGAACTTATGCACGCAGTGGATACGGAGAC
CGGATTTAAAACGCCGTTCGGCATCTTCTCCCCCAAAATATTTCTGATAGGTACCCTCACCGAAAAGATTCAGAGGGATG
GAAAAATCTCTTCGCTTCGCATCAGTGATCCGACCGGCGTGTTCTCCTGCTCCATGAACTGGCAGAACACCGCACTTCTC
AAAACCGCCGACGAGATCGATGCTCCCTCGTTCGTCGCCGTATTCGGCATGGTCAGGTTCCGCAAATATGCCGGCAGAAC
GTTTCTCGAGATCGTCCCGGAGACCATCACGCCCTCGACACGCGAGGCACGGGACGCCTGGATCCTGAGCACCGCCGAGT
CGGCGATCTCGCGGCTGGAAAAGTCCCCGGTCTCGGATATCAGGAAAGAACTTGCCGGACGGATCAGTGCGGCACTCTCC
TCAGTCAGACCCGCAGGTCCGAAAGAGGAGATCGCGAACGAAAAAATACTTGAGATCATCTCTTCCCTCTCCGAGAAAAA
AGGAGCGAGAATACTTGACGTCATCTCCTGCCTGAAAAGCCTCGGTCTTGACGAATCTTCGGCGAAGATGCGTCTTGGAA
TCCTTATGGAAGAAGGGGAATGCTACACCCCGACGACCGAATTCATCAAAATCGCCTGA

Upstream 100 bases:

>100_bases
GAAAACTTGCTCAGCTGAGGCCGCCCCTAAGGGGCAGCCCGCCAAAAAAAACATCCCCCTCGGTCGGTTTAATGCTCCCT
CAAACCAAATGAGTTAAGGA

Downstream 100 bases:

>100_bases
CCATGCAGCCGGAATTTTATGCAGAAGGACCCGCCGTCCTCATCGAAAGGCAGGAGCGTTCCCTGATAATAGCCGATCCC
CACTTCGGCGTCGAGGCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MDTQNTGLLPASRIFAGELMHAVDTETGFKTPFGIFSPKIFLIGTLTEKIQRDGKISSLRISDPTGVFSCSMNWQNTALL
KTADEIDAPSFVAVFGMVRFRKYAGRTFLEIVPETITPSTREARDAWILSTAESAISRLEKSPVSDIRKELAGRISAALS
SVRPAGPKEEIANEKILEIISSLSEKKGARILDVISCLKSLGLDESSAKMRLGILMEEGECYTPTTEFIKIA

Sequences:

>Translated_232_residues
MDTQNTGLLPASRIFAGELMHAVDTETGFKTPFGIFSPKIFLIGTLTEKIQRDGKISSLRISDPTGVFSCSMNWQNTALL
KTADEIDAPSFVAVFGMVRFRKYAGRTFLEIVPETITPSTREARDAWILSTAESAISRLEKSPVSDIRKELAGRISAALS
SVRPAGPKEEIANEKILEIISSLSEKKGARILDVISCLKSLGLDESSAKMRLGILMEEGECYTPTTEFIKIA
>Mature_232_residues
MDTQNTGLLPASRIFAGELMHAVDTETGFKTPFGIFSPKIFLIGTLTEKIQRDGKISSLRISDPTGVFSCSMNWQNTALL
KTADEIDAPSFVAVFGMVRFRKYAGRTFLEIVPETITPSTREARDAWILSTAESAISRLEKSPVSDIRKELAGRISAALS
SVRPAGPKEEIANEKILEIISSLSEKKGARILDVISCLKSLGLDESSAKMRLGILMEEGECYTPTTEFIKIA

Specific function: Unknown

COG id: COG3390

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25380; Mature: 25380

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTQNTGLLPASRIFAGELMHAVDTETGFKTPFGIFSPKIFLIGTLTEKIQRDGKISSLR
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCEEEE
ISDPTGVFSCSMNWQNTALLKTADEIDAPSFVAVFGMVRFRKYAGRTFLEIVPETITPST
ECCCCCEEEEECCCCCCCCEEEHHHCCCCHHHHHHHHHHHHHHHCCHHHHHCCHHCCCCC
REARDAWILSTAESAISRLEKSPVSDIRKELAGRISAALSSVRPAGPKEEIANEKILEII
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
SSLSEKKGARILDVISCLKSLGLDESSAKMRLGILMEEGECYTPTTEFIKIA
HHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCHHHHEECC
>Mature Secondary Structure
MDTQNTGLLPASRIFAGELMHAVDTETGFKTPFGIFSPKIFLIGTLTEKIQRDGKISSLR
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCEEEE
ISDPTGVFSCSMNWQNTALLKTADEIDAPSFVAVFGMVRFRKYAGRTFLEIVPETITPST
ECCCCCEEEEECCCCCCCCEEEHHHCCCCHHHHHHHHHHHHHHHCCHHHHHCCHHCCCCC
REARDAWILSTAESAISRLEKSPVSDIRKELAGRISAALSSVRPAGPKEEIANEKILEII
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
SSLSEKKGARILDVISCLKSLGLDESSAKMRLGILMEEGECYTPTTEFIKIA
HHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA