| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485333
Identifier: 124485333
GI number: 124485333
Start: 479417
End: 479965
Strand: Reverse
Name: 124485333
Synonym: Mlab_0508
Alternate gene names: NA
Gene position: 479965-479417 (Counterclockwise)
Preceding gene: 124485336
Following gene: 124485332
Centisome position: 26.59
GC content: 51.73
Gene sequence:
>549_bases ATGACTGAAAATTCCTGTCCTATGTGCGGAAGTACCTTCGGGTCGCTTTTGGCAAAAGGCATATTGATGATCATTCTCGG TATCCTGATGATGGTTTTCACTCTGGCATCCCTGTTTGCCAGCGAGATCCTGCTTGCGGTCCTGCTGATCTTCGTGGGTA TCACTCTTCTGACCGCAGGAACAACGTTTTTCGGTGAAGTAAAACGCACCTGGTGGGTCGTTCTTCTCGGTATCCTTGTG ATTCTCTTCGGCATCCTGGCTCTGATCTTCCCAGCTATCATGCTTGTGTACGCGATGTATGTTCTCGCAGCAGCCGCATT GATCGGCGGAGTCACCGACCTTGCCCTTGCCCTGATGGGGACCTCAGCTCAGGTCAACCGCGGTCTTCTCGCCGTTTCCG GTATCCTCGGCATCATTCTCGGTATCCTGTTCCTGATCAATCCGATCATCTCGGCATTCACGATCGTCGAGATCGCGGGT ATCTTCTTCTTTGCTTTCGGTATCGTTGCGATCATCGAAGCATTCATGGCAAAATCCGCGACCGCATAA
Upstream 100 bases:
>100_bases GGCATAGGCTAAGTAAGTTAACTATTTTGTATTTGAACTATTTATACATGTCAACCCGTTATACGATGATTTAATACGTT TGCGGGTGTATTTTCATTAT
Downstream 100 bases:
>100_bases ACGCTGAGAAACCTCAGCTTTTTTTTGCGGGGACCTTTAGGTCCCTCAGCCGAGCAAATCTTTGATTTGCGAGTGTGCAG TGCTTTTCGAGCACTGTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MTENSCPMCGSTFGSLLAKGILMIILGILMMVFTLASLFASEILLAVLLIFVGITLLTAGTTFFGEVKRTWWVVLLGILV ILFGILALIFPAIMLVYAMYVLAAAALIGGVTDLALALMGTSAQVNRGLLAVSGILGIILGILFLINPIISAFTIVEIAG IFFFAFGIVAIIEAFMAKSATA
Sequences:
>Translated_182_residues MTENSCPMCGSTFGSLLAKGILMIILGILMMVFTLASLFASEILLAVLLIFVGITLLTAGTTFFGEVKRTWWVVLLGILV ILFGILALIFPAIMLVYAMYVLAAAALIGGVTDLALALMGTSAQVNRGLLAVSGILGIILGILFLINPIISAFTIVEIAG IFFFAFGIVAIIEAFMAKSATA >Mature_181_residues TENSCPMCGSTFGSLLAKGILMIILGILMMVFTLASLFASEILLAVLLIFVGITLLTAGTTFFGEVKRTWWVVLLGILVI LFGILALIFPAIMLVYAMYVLAAAALIGGVTDLALALMGTSAQVNRGLLAVSGILGIILGILFLINPIISAFTIVEIAGI FFFAFGIVAIIEAFMAKSATA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19099; Mature: 18968
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTENSCPMCGSTFGSLLAKGILMIILGILMMVFTLASLFASEILLAVLLIFVGITLLTAG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TTFFGEVKRTWWVVLLGILVILFGILALIFPAIMLVYAMYVLAAAALIGGVTDLALALMG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TSAQVNRGLLAVSGILGIILGILFLINPIISAFTIVEIAGIFFFAFGIVAIIEAFMAKSA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TA CC >Mature Secondary Structure TENSCPMCGSTFGSLLAKGILMIILGILMMVFTLASLFASEILLAVLLIFVGITLLTAG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TTFFGEVKRTWWVVLLGILVILFGILALIFPAIMLVYAMYVLAAAALIGGVTDLALALMG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TSAQVNRGLLAVSGILGIILGILFLINPIISAFTIVEIAGIFFFAFGIVAIIEAFMAKSA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA